RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 PPP6R3Q5H9R7 873 aaPredicted RBP5.87□□□□□ -1.47
SMG7-208ENST00000493609 LRIF1Q5T3J3 769 aa5.87□□□□□ -1.47
SMG7-208ENST00000493609 SIGIRRQ6IA17 410 aa5.87□□□□□ -1.47
SMG7-208ENST00000493609 DPPA4Q7L190 304 aa5.87□□□□□ -1.47
SMG7-208ENST00000493609 CHST9Q7L1S5 443 aa5.87□□□□□ -1.47
SMG7-208ENST00000493609 TMED6Q8WW62 240 aa5.87□□□□□ -1.47
SMG7-208ENST00000493609 ELMOD3Q96FG2 381 aa5.87□□□□□ -1.47
SMG7-208ENST00000493609 ZNF479Q96JC4 524 aa5.87□□□□□ -1.47
SMG7-208ENST00000493609 HARBI1Q96MB7 349 aa5.87□□□□□ -1.47
SMG7-208ENST00000493609 MMTAG2Q9BU76 263 aaKnown RBP5.87□□□□□ -1.47
SMG7-208ENST00000493609 ZNF215Q9UL58 517 aaPredicted RBP5.87□□□□□ -1.47
SMG7-208ENST00000493609 TTC7AQ9ULT0 858 aaPredicted RBP5.87□□□□□ -1.47
SMG7-208ENST00000493609 MTMR6Q9Y217 621 aa5.87□□□□□ -1.47
SMG7-208ENST00000493609 R3HDM2Q9Y2K5 976 aaKnown RBP5.87□□□□□ -1.47
SMG7-208ENST00000493609 SNX9Q9Y5X1 595 aa5.87□□□□□ -1.47
SMG7-208ENST00000493609 ADAMTS12P58397 1594 aa5.87□□□□□ -1.47
SMG7-208ENST00000493609 GOLGA3Q08378 1498 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 A0A0U1RQJ8 604 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 CLEC18AA5D8T8 446 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 A8MZ25 164 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 H3BQ06 376 aaPredicted RBP5.86□□□□□ -1.47
SMG7-208ENST00000493609 HCRTR2O43614 444 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 ZNF12P17014 697 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 CLNS1AP54105 237 aaKnown RBP5.86□□□□□ -1.47
SMG7-208ENST00000493609 NANOS2P60321 138 aaKnown RBP5.86□□□□□ -1.47
SMG7-208ENST00000493609 MC1RQ01726 317 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 CREB5Q02930 508 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 NAB2Q15742 525 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 AMZ1Q400G9 498 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 XKR9Q5GH70 373 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 EFHC1Q5JVL4 640 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 SPATA1Q5VX52 437 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 KIAA0930Q6ICG6 404 aaPredicted RBP5.86□□□□□ -1.47
SMG7-208ENST00000493609 WDR73Q6P4I2 378 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 TMEM154Q6P9G4 183 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 CLEC4GQ6UXB4 293 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 SEPT14Q6ZU15 432 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 IQCF1Q8N6M8 205 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 CLEC18CQ8NCF0 446 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 FAM216AQ8WUB2 273 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 SGCDQ92629 289 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 PHF21BQ96EK2 531 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 SEZ6LQ9BYH1 1024 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 SYNCQ9H7C4 482 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 C17orf75Q9HAS0 396 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 ACSS1Q9NUB1 689 aaPredicted RBP5.86□□□□□ -1.47
SMG7-208ENST00000493609 SETD4Q9NVD3 440 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 ADD3Q9UEY8 706 aaKnown RBP5.86□□□□□ -1.47
SMG7-208ENST00000493609 VPS28Q9UK41 221 aa5.86□□□□□ -1.47
SMG7-208ENST00000493609 CTTNBP2Q8WZ74 1663 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 MAGI1Q96QZ7 1491 aaPredicted RBP5.85□□□□□ -1.47
SMG7-208ENST00000493609 SOGA1O94964 1423 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 ATXN2Q99700 1313 aaKnown RBP5.85□□□□□ -1.47
SMG7-208ENST00000493609 AGAP14A8MT82 685 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 PLRG1O43660 514 aaKnown RBP5.85□□□□□ -1.47
SMG7-208ENST00000493609 JRKO75564 520 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 NGFRP08138 427 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 SNHG28P0DPA3 235 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 DDX5P17844 614 aaKnown RBP5.85□□□□□ -1.47
SMG7-208ENST00000493609 PDLIM4P50479 330 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 RAD23BP54727 409 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 NLRP5P59047 1200 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 ASTE1Q2TB18 679 aaPredicted RBP5.85□□□□□ -1.47
SMG7-208ENST00000493609 PCGF5Q86SE9 256 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 HJURPQ8NCD3 748 aaPredicted RBP5.85□□□□□ -1.47
SMG7-208ENST00000493609 ELP5Q8TE02 316 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 GRAMD2BQ96HH9 432 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 ZPBPQ9BS86 351 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 SMARCAD1Q9H4L7 1026 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 SEBOXQ9HB31 216 aaPredicted RBP5.85□□□□□ -1.47
SMG7-208ENST00000493609 FBXO2Q9UK22 296 aaPredicted RBP5.85□□□□□ -1.47
SMG7-208ENST00000493609 SESN1Q9Y6P5 492 aa5.85□□□□□ -1.47
SMG7-208ENST00000493609 ATP2A1O14983 1001 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 SCAMP1O15126 338 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 INSIG1O15503 277 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 SMAD6O43541 496 aaKnown RBP5.84□□□□□ -1.47
SMG7-208ENST00000493609 GJB3O75712 270 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 EGFP01133 1207 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 ALOX12P18054 663 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 GABRB1P18505 474 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 BDKRB2P30411 391 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 FOXG1P55316 489 aaPredicted RBP5.84□□□□□ -1.47
SMG7-208ENST00000493609 EGR4Q05215 589 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 LTBQ06643 244 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 TRAF2Q12933 501 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 FHL1Q13642 323 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 IRF3Q14653 427 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 HLFQ16534 295 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 DUSP28Q4G0W2 176 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 SETMARQ53H47 684 aaPredicted RBP5.84□□□□□ -1.47
SMG7-208ENST00000493609 JADE1Q6IE81 842 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 DUS1LQ6P1R4 473 aaKnown RBP5.84□□□□□ -1.47
SMG7-208ENST00000493609 SZRD1Q7Z422 152 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 ADGRF2Q8IZF7 708 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 OR2AK2Q8NG84 335 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 FAM120BQ96EK7 910 aaKnown RBP5.84□□□□□ -1.47
SMG7-208ENST00000493609 SCMH1Q96GD3 660 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 SEPT5Q99719 369 aaPredicted RBP5.84□□□□□ -1.47
SMG7-208ENST00000493609 SH3GL2Q99962 352 aa5.84□□□□□ -1.47
SMG7-208ENST00000493609 NCAPGQ9BPX3 1015 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms