RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 SLC30A4O14863 429 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 WNT9AO14904 365 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 GDF9O60383 454 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 LRP3O75074 770 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 ADRB1P08588 477 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 NMBRP28336 390 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 HMGCLP35914 325 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 SPINT3P49223 89 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 FGL2Q14314 439 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 FASTKD3Q14CZ7 662 aaKnown RBP17.15■□□□□ 0.34
LIME1-208ENST00000493265 TMEM259Q4ZIN3 620 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 TSTD2Q5T7W7 516 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 LPCAT2Q7L5N7 544 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 TRIM69Q86WT6 500 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 IGDCC3Q8IVU1 814 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 ZBED8Q8IZ13 594 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 BIRC7Q96CA5 298 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 NUS1Q96E22 293 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 HSPA12BQ96MM6 686 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 RANBP9Q96S59 729 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 FMO2Q99518 471 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 IL17CQ9P0M4 197 aa17.15■□□□□ 0.34
LIME1-208ENST00000493265 CHD8Q9HCK8 2581 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 MROH6A6NGR9 719 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 PSMD11O00231 422 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 PCCBP05166 539 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 IGHV4-34P06331 123 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 MYBL2P10244 700 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 BPIP17213 487 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 GM2AP17900 193 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 MAOBP27338 520 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 ECHS1P30084 290 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 DHPSP49366 369 aaPredicted RBP17.14■□□□□ 0.33
LIME1-208ENST00000493265 CCR5P51681 352 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 ZNF140P52738 457 aaPredicted RBP17.14■□□□□ 0.33
LIME1-208ENST00000493265 VSNL1P62760 191 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 PDE1BQ01064 536 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 LAMB3Q13751 1172 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 CSRP2Q16527 193 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 SETMARQ53H47 684 aaPredicted RBP17.14■□□□□ 0.33
LIME1-208ENST00000493265 ESRP1Q6NXG1 681 aaKnown RBP17.14■□□□□ 0.33
LIME1-208ENST00000493265 FAM151BQ6UXP7 276 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 CAPN12Q6ZSI9 719 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 TECPR1Q7Z6L1 1165 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 SLC41A1Q8IVJ1 513 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 GPR26Q8NDV2 337 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 FBXO36Q8NEA4 188 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 SCAMP4Q969E2 229 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 ZNF669Q96BR6 464 aaPredicted RBP17.14■□□□□ 0.33
LIME1-208ENST00000493265 DTD2Q96FN9 168 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 EBNA1BP2Q99848 306 aaKnown RBP17.14■□□□□ 0.33
LIME1-208ENST00000493265 RIOK2Q9BVS4 552 aaKnown RBP17.14■□□□□ 0.33
LIME1-208ENST00000493265 C1QTNF2Q9BXJ5 285 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 FAM129AQ9BZQ8 928 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 MIR1-1HGQ9H1L0 117 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 SUDS3Q9H7L9 328 aaPredicted RBP17.14■□□□□ 0.33
LIME1-208ENST00000493265 FKBPLQ9UIM3 349 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 SOX13Q9UN79 622 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 CA5BQ9Y2D0 317 aa17.14■□□□□ 0.33
LIME1-208ENST00000493265 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.14■□□□□ 0.33
LIME1-208ENST00000493265 SPAG17Q6Q759 2223 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 LRRK1Q38SD2 2015 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 METTL12A8MUP2 240 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 RAD51BO15315 384 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 ELF2Q15723 593 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 SKIDA1Q1XH10 827 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 KDM7AQ6ZMT4 941 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 NLRP9Q7RTR0 991 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 RGL4Q8IZJ4 473 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 CBARPQ8N350 705 aaPredicted RBP17.13■□□□□ 0.33
LIME1-208ENST00000493265 CADM4Q8NFZ8 388 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 STYXQ8WUJ0 223 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 AP2M1Q96CW1 435 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 MFSD3Q96ES6 412 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 C9orf72Q96LT7 481 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 WDR83Q9BRX9 315 aaKnown RBP17.13■□□□□ 0.33
LIME1-208ENST00000493265 KIFC1Q9BW19 673 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 SPATA16Q9BXB7 569 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 C1QTNF7Q9BXJ2 289 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 PARD6BQ9BYG5 372 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 FOXP3Q9BZS1 431 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 ABCG8Q9H221 673 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 FAM83DQ9H4H8 585 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 EBF2Q9HAK2 575 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 NLE1Q9NVX2 485 aaPredicted RBP17.13■□□□□ 0.33
LIME1-208ENST00000493265 ZC3H7BQ9UGR2 993 aaKnown RBP17.13■□□□□ 0.33
LIME1-208ENST00000493265 EIF2B4Q9UI10 523 aaKnown RBP17.13■□□□□ 0.33
LIME1-208ENST00000493265 RPS6KL1Q9Y6S9 549 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 SDK1Q7Z5N4 2213 aa17.13■□□□□ 0.33
LIME1-208ENST00000493265 PLXND1Q9Y4D7 1925 aa17.12■□□□□ 0.33
LIME1-208ENST00000493265 MAGEB16A2A368 324 aa17.12■□□□□ 0.33
LIME1-208ENST00000493265 OR51F1A6NGY5 319 aa17.12■□□□□ 0.33
LIME1-208ENST00000493265 E7ESA3 106 aa17.12■□□□□ 0.33
LIME1-208ENST00000493265 FAM153BP0C7A2 387 aa17.12■□□□□ 0.33
LIME1-208ENST00000493265 PGAM1P18669 254 aa17.12■□□□□ 0.33
LIME1-208ENST00000493265 SPAM1P38567 509 aa17.12■□□□□ 0.33
LIME1-208ENST00000493265 PTGER3P43115 390 aa17.12■□□□□ 0.33
LIME1-208ENST00000493265 MAGEA4P43358 317 aa17.12■□□□□ 0.33
LIME1-208ENST00000493265 ARSDP51689 593 aa17.12■□□□□ 0.33
LIME1-208ENST00000493265 CLDN2P57739 230 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms