RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 LVRNQ6Q4G3 990 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 PAF1Q8N7H5 531 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 CNTD1Q8N815 330 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 OR56A4Q8NGH8 313 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 CCL4L1Q8NHW4 92 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 SNIP1Q8TAD8 396 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 NUS1Q96E22 293 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 C16orf45Q96MC5 204 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 NAPGQ99747 312 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 HEMGNQ9BXL5 484 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 TLR10Q9BXR5 811 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 TEX101Q9BY14 249 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 TMEM168Q9H0V1 697 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 PADI4Q9UM07 663 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 hCG_1818297A0A087WSY0 165 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 A0A1W2PQ67 120 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 TNFRSF10CO14798 259 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 CST8O60676 142 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 USP12O75317 370 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 TJP3O95049 919 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 ATP1A1P05023 1023 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 CEACAM5P06731 702 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 MMP2P08253 660 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 CTSEP14091 401 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 CCNB1P14635 433 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 ELOCQ15369 112 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 PPP2R5EQ16537 467 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 OGFOD3Q6PK18 319 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 PDZD3Q86UT5 571 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 HEATR4Q86WZ0 1026 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 BBS5Q8N3I7 341 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 ARL10Q8N8L6 244 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 NSMCE1Q8WV22 266 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 HDAC11Q96DB2 347 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 ATXN7L3BQ96GX2 97 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 DEPDC7Q96QD5 511 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 WDR24Q96S15 920 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 LGMNQ99538 433 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 CCDC3Q9BQI4 270 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 FRMD8Q9BZ67 464 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 OSBPL8Q9BZF1 889 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 POLR1EQ9GZS1 481 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 ABCG4Q9H172 646 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 CARD9Q9H257 536 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 WDR26Q9H7D7 661 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 ASCL3Q9NQ33 180 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 RBM22Q9NW64 420 aaKnown RBP eCLIP12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 GULP1Q9UBP9 304 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 GPR34Q9UPC5 381 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 HEY1Q9Y5J3 304 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 ENTPD2Q9Y5L3 495 aa12.67□□□□□ -0.38
SEC61A1-206ENST00000491668 FASNP49327 2511 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 ARHGEF17Q96PE2 2063 aaPredicted RBP12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 A0A0J9YYE9 177 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 A0A1W2PQM1 296 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 KCNK1O00180 336 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 PSMD11O00231 422 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 CACNB4O00305 520 aaPredicted RBP12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 NTN3O00634 580 aaPredicted RBP12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 CEP104O60308 925 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 NOBOXO60393 691 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 TNFP01375 233 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 TRBC1P01850 177 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 MYCLP1P12525 358 aaPredicted RBP12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 CXCR5P32302 372 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 LSSP48449 732 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 POLD2P49005 469 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 RPIAP49247 311 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 ETF1P62495 437 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 GABREP78334 506 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 CDK3Q00526 305 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 PTSQ03393 145 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 DPTQ07507 201 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 PPIDQ08752 370 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 ITKQ08881 620 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 ZBTB17Q13105 803 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 TBC1D25Q3MII6 688 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 LRRC66Q68CR7 880 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 SLC9A4Q6AI14 798 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 SYT10Q6XYQ8 523 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 BZW1Q7L1Q6 419 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 NRROSQ86YC3 692 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 SDR16C5Q8N3Y7 309 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 GPR156Q8NFN8 814 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 ZNF592Q92610 1267 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 P3H4Q92791 437 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 FGF11Q92914 225 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 NAT6Q93015 286 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 SCAMP4Q969E2 229 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 CCDC74AQ96AQ1 378 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 PRR11Q96HE9 360 aaPredicted RBP12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 HIC2Q96JB3 615 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 PBKQ96KB5 322 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 AGAP2Q99490 1192 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 TDRD1Q9BXT4 1180 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 CYP4F12Q9HCS2 524 aa12.66□□□□□ -0.38
SEC61A1-206ENST00000491668 EVA1BQ9NVM1 165 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms