RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 MCL1Q07820 350 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 KLC1Q07866 573 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 DNAJC3Q13217 504 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PICALMQ13492 652 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 MAMLD1Q13495 774 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 RAB32Q13637 225 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PTK6Q13882 451 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 KPNB1Q14974 876 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 KRT72Q14CN4 511 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 NAA25Q14CX7 972 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 MORF4L2Q15014 288 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SIX1Q15475 284 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TAF11Q15544 211 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 GPR162Q16538 588 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PDK4Q16654 411 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 LONRF1Q17RB8 773 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SGSM1Q2NKQ1 1148 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CBWD6Q4V339 395 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 EPC2Q52LR7 807 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM133BQ5BKY9 247 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CBWD3Q5JTY5 395 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CBWD5Q5RIA9 395 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 STXBP5Q5T5C0 1151 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 C6orf163Q5TEZ5 329 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 DCAF12L1Q5VU92 463 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ANKRD20A3Q5VUR7 823 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 FKBP1CQ5VVH2 108 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 MORN5Q5VZ52 161 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 FCRL6Q6DN72 434 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CAPRIN2Q6IMN6 1127 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PLEKHA7Q6IQ23 1121 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PRR5LQ6MZQ0 368 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TTC27Q6P3X3 843 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 AAGABQ6PD74 315 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 GJB7Q6PEY0 223 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC174Q6PII3 467 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 VSTM1Q6UX27 236 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CATSPERGQ6ZRH7 1159 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 Q6ZWC4 215 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CENPUQ71F23 418 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 BZW1Q7L1Q6 419 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 GSTA5Q7RTV2 222 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 MIER3Q7Z3K6 550 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 MRPL10Q7Z7H8 261 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TRABD2AQ86V40 505 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PIM3Q86V86 326 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 LONP2Q86WA8 852 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC25Q86WR0 208 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PHF13Q86YI8 300 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 EXOC8Q8IYI6 725 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 THNSL1Q8IYQ7 743 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 KATNAL2Q8IYT4 538 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 IZUMO1Q8IYV9 350 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 MCOLN2Q8IZK6 566 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ABRAQ8N0Z2 381 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 VPS52Q8N1B4 723 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ARHGAP24Q8N264 748 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ZCCHC9Q8N567 271 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ENDOVQ8N8Q3 282 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CNBD1Q8NA66 436 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PPFIBP2Q8ND30 876 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CMASQ8NFW8 434 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 RP9Q8TA86 221 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF564Q8TBZ8 553 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 LRRC8CQ8TDW0 803 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 AGAP11Q8TF27 550 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ATP8B4Q8TF62 1192 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PYROXD1Q8WU10 500 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ZFAND2BQ8WV99 257 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM151AQ8WW52 585 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 C1orf54Q8WWF1 131 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF606Q8WXB4 792 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PSPC1Q8WXF1 523 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SHC3Q92529 594 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 N4BP2L2Q92802 583 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 GJA10Q969M2 543 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 C18orf8Q96DM3 657 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ARHGEF26Q96DR7 871 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SPDL1Q96EA4 605 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 STAMBPL1Q96FJ0 436 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 NT5C1BQ96P26 610 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 NR1H4Q96RI1 486 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 NUDCD1Q96RS6 583 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SMC6Q96SB8 1091 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 FIZ1Q96SL8 496 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PCDHB18PQ96TA0 734 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 P2RX7Q99572 595 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SELENOSQ9BQE4 189 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SENP7Q9BQF6 1050 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TRIM51Q9BSJ1 452 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 C17orf80Q9BSJ5 609 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC28BQ9BUN5 200 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 EFHD1Q9BUP0 239 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 NUP85Q9BW27 656 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TBC1D10AQ9BXI6 508 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 FGFBP2Q9BYJ0 223 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 FRMD8Q9BZ67 464 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 OSBPL8Q9BZF1 889 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 INO80BQ9C086 356 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 DCLK3Q9C098 648 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms