RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 NUDT1P36639 197 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 FNTBP49356 437 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 ARSDP51689 593 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 GPX6P59796 221 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 PPP2CBP62714 309 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 PPP2CAP67775 309 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 TMPRSS15P98073 1019 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 DMWDQ09019 674 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 PTPRCAPQ14761 206 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 KYNUQ16719 465 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 ZNF284Q2VY69 593 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 ZNF528Q3MIS6 628 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 SEL1L3Q68CR1 1132 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 KIAA0895LQ68EN5 471 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 PDPK2PQ6A1A2 396 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 ZNF449Q6P9G9 518 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 CYS1Q717R9 158 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 C11orf74Q86VG3 221 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 NLRP8Q86W28 1048 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 MREGQ8N565 214 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 GPR26Q8NDV2 337 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 HDAC10Q969S8 669 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 CERS2Q96G23 380 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 SGSM3Q96HU1 749 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 TBATAQ96M53 351 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 FCRL3Q96P31 734 aaPredicted RBP18.57■□□□□ 0.56
MCF2L-230ENST00000491028 GPR174Q9BXC1 333 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 SEMA4AQ9H3S1 761 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 FAM83DQ9H4H8 585 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 FKBPLQ9UIM3 349 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 COQ6Q9Y2Z9 468 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 TRPM6Q9BX84 2022 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 NUMA1Q14980 2115 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 GLYATL1P3A0A0U1RQE8 302 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 LATO43561 262 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 SSTR1P30872 391 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 STX2P32856 288 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 XIAPP98170 497 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 DPTQ07507 201 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 SGCGQ13326 291 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 HENMT1Q5T8I9 393 aaKnown RBP18.56■□□□□ 0.56
MCF2L-230ENST00000491028 C3orf62Q6ZUJ4 267 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 LMNTD2Q8IXW0 634 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 DENND6BQ8NEG7 585 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 CADM4Q8NFZ8 388 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 GABPB2Q8TAK5 448 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-230ENST00000491028 ZSCAN5AQ9BUG6 496 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 FUT8Q9BYC5 575 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 SLC17A9Q9BYT1 436 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 VPS37BQ9H9H4 285 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 IL26Q9NPH9 171 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 SLC30A1Q9Y6M5 507 aa18.56■□□□□ 0.56
MCF2L-230ENST00000491028 CACNA1IQ9P0X4 2223 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 GAPDHSO14556 408 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-230ENST00000491028 RIPK2O43353 540 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 VAPBO95292 243 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 PYGLP06737 847 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 ABHD2P08910 425 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 ARNTP27540 789 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 MC4RP32245 332 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 ARCN1P48444 511 aaKnown RBP18.55■□□□□ 0.56
MCF2L-230ENST00000491028 PEX6Q13608 980 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 ITGA9Q13797 1035 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 SETMARQ53H47 684 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-230ENST00000491028 ALS2CLQ60I27 953 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 CAPN12Q6ZSI9 719 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 RFLNAQ6ZTI6 216 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 KCNMB4Q86W47 210 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 TRAM1L1Q8N609 369 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 FAM160A2Q8N612 972 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-230ENST00000491028 FRMD1Q8N878 549 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 OR6P1Q8NGX9 317 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 OR4L1Q8NH43 312 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 NELL1Q92832 810 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 AP2M1Q96CW1 435 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 LENG8Q96PV6 779 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-230ENST00000491028 FAM167BQ9BTA0 163 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 C1QTNF1Q9BXJ1 281 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 ABCG8Q9H221 673 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 C6orf106Q9H6K1 298 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-230ENST00000491028 C20orf96Q9NUD7 363 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-230ENST00000491028 MOCS1Q9NZB8 636 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 CD84Q9UIB8 345 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 MBD1Q9UIS9 605 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-230ENST00000491028 DMTF1Q9Y222 760 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 MUC3AQ02505 3323 aa18.55■□□□□ 0.56
MCF2L-230ENST00000491028 A0A087WUV0 522 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-230ENST00000491028 TCRBV9S1A1TA0A576 114 aa18.54■□□□□ 0.56
MCF2L-230ENST00000491028 CCDC162PA2VCL2 907 aa18.54■□□□□ 0.56
MCF2L-230ENST00000491028 CCL22O00626 93 aa18.54■□□□□ 0.56
MCF2L-230ENST00000491028 SRP72O76094 671 aaKnown RBP18.54■□□□□ 0.56
MCF2L-230ENST00000491028 PRAMEF1O95521 474 aa18.54■□□□□ 0.56
MCF2L-230ENST00000491028 ACSL3O95573 720 aa18.54■□□□□ 0.56
MCF2L-230ENST00000491028 GOT2P00505 430 aaKnown RBP18.54■□□□□ 0.56
MCF2L-230ENST00000491028 IGHV4-34P06331 123 aa18.54■□□□□ 0.56
MCF2L-230ENST00000491028 H2AFXP16104 143 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-230ENST00000491028 ITGALP20701 1170 aa18.54■□□□□ 0.56
MCF2L-230ENST00000491028 MGAT5Q09328 741 aa18.54■□□□□ 0.56
MCF2L-230ENST00000491028 THOC5Q13769 683 aaKnown RBP18.54■□□□□ 0.56
MCF2L-230ENST00000491028 FGL2Q14314 439 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms