RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 ART1P52961 327 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 NIPAL4Q0D2K0 466 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 MAMLD1Q13495 774 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 GKAP1Q5VSY0 366 aaPredicted RBP4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 C9orf57Q5W0N0 161 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 ZNF280DQ6N043 979 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 DPPA4Q7L190 304 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 CHERPQ8IWX8 916 aaKnown RBP4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 ZNF34Q8IZ26 560 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 WDTC1Q8N5D0 677 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 SPATA22Q8NHS9 363 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 NEK9Q8TD19 979 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 DUSP19Q8WTR2 217 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 ORAI1Q96D31 301 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 ADGRG7Q96K78 797 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 C1orf74Q96LT6 269 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 MEIS3Q99687 375 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 LRRC4Q9HBW1 653 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 BLOC1S4Q9NUP1 217 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 C1RLQ9NZP8 487 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 PCDHGB1Q9Y5G3 927 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 MAU2Q9Y6X3 613 aa4.47□□□□□ -1.69
PRPF4B-207ENST00000490399 SCN5AQ14524 2016 aa4.46□□□□□ -1.69
PRPF4B-207ENST00000490399 F5H0A9 414 aaPredicted RBP4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 MID1O15344 667 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 DOK2O60496 412 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 PTP4A3O75365 173 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 SLC25A12O75746 678 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 DDNO94850 711 aaPredicted RBP4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 PMS2P2O95744 297 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 DDX58O95786 925 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 LINC00271P0C7V0 271 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 ACADMP11310 421 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 SRCP12931 536 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 HADHAP40939 763 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 GALCP54803 685 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 EIF4A2Q14240 407 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 ASIC2Q16515 512 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 LRIF1Q5T3J3 769 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 KLHL35Q6PF15 583 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 SATL1Q86VE3 508 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 ODF3L1Q8IXM7 274 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 BEST3Q8N1M1 668 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 SRBD1Q8N5C6 995 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 PCDH20Q8N6Y1 951 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 WFIKKN2Q8TEU8 576 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 TANKQ92844 425 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 APBB2Q92870 758 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 CMTM3Q96MX0 182 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 SH3GL2Q99962 352 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 C1QTNF4Q9BXJ3 329 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 SLCO5A1Q9H2Y9 848 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 PDZD7Q9H5P4 517 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 C6orf106Q9H6K1 298 aaPredicted RBP4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 EIF2B3Q9NR50 452 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 ZNF580Q9UK33 172 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 PDS5AQ29RF7 1337 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 ITIH6Q6UXX5 1313 aa4.46□□□□□ -1.7
PRPF4B-207ENST00000490399 FRMD3A2A2Y4 597 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 ATP2A1O14983 1001 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 GAGE7O76087 117 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 SCGB1D1O95968 90 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 GAGE12FP0CL80 117 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 GAGE12GP0CL81 117 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 GAGE12IP0CL82 117 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 FGF3P11487 239 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 PIK3CAP42336 1068 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 SEC61BP60468 96 aaKnown RBP4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 CSNK2A1P68400 391 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 EEF1A2Q05639 463 aaKnown RBP4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 LMOD3Q0VAK6 560 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 CDC16Q13042 620 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 GAGE1Q13065 139 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 GAGE4Q13068 117 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 SNTA1Q13424 505 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 KCNT1Q5JUK3 1230 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 CAPRIN2Q6IMN6 1127 aaKnown RBP4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 KCTD18Q6PI47 426 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 CRELD2Q6UXH1 353 aaPredicted RBP4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 CSNK2A3Q8NEV1 391 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 ELMOD3Q96FG2 381 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 HARBI1Q96MB7 349 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 PIGMQ9H3S5 423 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 KAT14Q9H8E8 782 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 PLEKHA5Q9HAU0 1116 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 HCFC1R1Q9NWW0 138 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 SMARCAL1Q9NZC9 954 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 SELENONQ9NZV5 590 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 COPG2Q9UBF2 871 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 SIX4Q9UIU6 781 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 CLIC4Q9Y696 253 aa4.45□□□□□ -1.7
PRPF4B-207ENST00000490399 PLSCR5A0PG75 271 aa4.44□□□□□ -1.7
PRPF4B-207ENST00000490399 MYO1GB0I1T2 1018 aa4.44□□□□□ -1.7
PRPF4B-207ENST00000490399 AP3D1O14617 1153 aa4.44□□□□□ -1.7
PRPF4B-207ENST00000490399 NDUFS3O75489 264 aa4.44□□□□□ -1.7
PRPF4B-207ENST00000490399 JRKO75564 520 aa4.44□□□□□ -1.7
PRPF4B-207ENST00000490399 RFPL2O75678 378 aa4.44□□□□□ -1.7
PRPF4B-207ENST00000490399 DDX5P17844 614 aaKnown RBP4.44□□□□□ -1.7
PRPF4B-207ENST00000490399 CLCNKAP51800 687 aa4.44□□□□□ -1.7
PRPF4B-207ENST00000490399 RAD23BP54727 409 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms