RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 NFKBIL1Q9UBC1 381 aaPredicted RBP11.78□□□□□ -0.52
SRSF4-204ENST00000489898 TMPRSS11EQ9UL52 423 aa11.78□□□□□ -0.52
SRSF4-204ENST00000489898 SUFUQ9UMX1 484 aa11.78□□□□□ -0.52
SRSF4-204ENST00000489898 GPR34Q9UPC5 381 aa11.78□□□□□ -0.52
SRSF4-204ENST00000489898 CHKBQ9Y259 395 aa11.78□□□□□ -0.52
SRSF4-204ENST00000489898 CACNB4O00305 520 aaPredicted RBP11.77□□□□□ -0.53
SRSF4-204ENST00000489898 KRT7P08729 469 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 CA5AP35218 305 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 ETV5P41161 510 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 BLKP51451 505 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 ERVPABLB-1P60509 514 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 POLR2LP62875 67 aaKnown RBP11.77□□□□□ -0.53
SRSF4-204ENST00000489898 WASHC5Q12768 1159 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 SRSF6Q13247 344 aaKnown RBP11.77□□□□□ -0.53
SRSF4-204ENST00000489898 MESDQ14696 234 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 HADHQ16836 314 aaKnown RBP11.77□□□□□ -0.53
SRSF4-204ENST00000489898 C14orf28Q4W4Y0 310 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 LRRC38Q5VT99 294 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 XKR5Q6UX68 686 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 ZNF574Q6ZN55 896 aaPredicted RBP11.77□□□□□ -0.53
SRSF4-204ENST00000489898 USP45Q70EL2 814 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 B4GALNT4Q76KP1 1039 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 RD3Q7Z3Z2 195 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 NLRP8Q86W28 1048 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 CCDC13Q8IYE1 715 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 TPCN2Q8NHX9 752 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 IMP4Q96G21 291 aaKnown RBP11.77□□□□□ -0.53
SRSF4-204ENST00000489898 ZNF578Q96N58 590 aaPredicted RBP11.77□□□□□ -0.53
SRSF4-204ENST00000489898 FOXP3Q9BZS1 431 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 RBM22Q9NW64 420 aaKnown RBP eCLIP11.77□□□□□ -0.53
SRSF4-204ENST00000489898 TRNAU1APQ9NX07 287 aaKnown RBP11.77□□□□□ -0.53
SRSF4-204ENST00000489898 ACSL6Q9UKU0 697 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 ATXN7L1Q9ULK2 861 aaPredicted RBP11.77□□□□□ -0.53
SRSF4-204ENST00000489898 SPO11Q9Y5K1 396 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 AK5Q9Y6K8 562 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 MYO18BQ8IUG5 2567 aa11.77□□□□□ -0.53
SRSF4-204ENST00000489898 LRRD1A4D1F6 860 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 B4DGG1 531 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 EFSO43281 561 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 B4GAT1O43505 415 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 CLDN7O95471 211 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 RPLP0P05388 317 aaKnown RBP11.76□□□□□ -0.53
SRSF4-204ENST00000489898 CYP2A6P11509 494 aaPredicted RBP11.76□□□□□ -0.53
SRSF4-204ENST00000489898 HGFP14210 728 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 GLB1P16278 677 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 ZNF30P17039 623 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 COMTP21964 271 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 HTR1BP28222 390 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 ADCY8P40145 1251 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 CD86P42081 329 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 PCBP4P57723 403 aaKnown RBP11.76□□□□□ -0.53
SRSF4-204ENST00000489898 CTBSQ01459 385 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 CCDC173Q0VFZ6 552 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 CLN3Q13286 438 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 C16orf72Q14CZ0 275 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 SLC14A2Q15849 920 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 KHDC1Q4VXA5 237 aaKnown RBP11.76□□□□□ -0.53
SRSF4-204ENST00000489898 PYCR3Q53H96 274 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 DENND2CQ68D51 928 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 TIGD7Q6NT04 549 aaPredicted RBP11.76□□□□□ -0.53
SRSF4-204ENST00000489898 LYSMD3Q7Z3D4 306 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 GKN2Q86XP6 184 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 CCNJLQ8IV13 435 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 TMEM139Q8IV31 216 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 KRT35Q92764 455 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 LRRN3Q9H3W5 708 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 CARS2Q9HA77 564 aaKnown RBP11.76□□□□□ -0.53
SRSF4-204ENST00000489898 PCDH9Q9HC56 1237 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 TAAR2Q9P1P5 351 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 SAE1Q9UBE0 346 aaPredicted RBP11.76□□□□□ -0.53
SRSF4-204ENST00000489898 INTUQ9ULD6 942 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 COL12A1Q99715 3063 aa11.76□□□□□ -0.53
SRSF4-204ENST00000489898 CCDC187A0A096LP49 1063 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 GAPDHSO14556 408 aaPredicted RBP11.75□□□□□ -0.53
SRSF4-204ENST00000489898 AURKAO14965 403 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 PPM1DO15297 605 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 NUDT21O43809 227 aaKnown RBP11.75□□□□□ -0.53
SRSF4-204ENST00000489898 MT-CYBP00156 380 aaPredicted RBP11.75□□□□□ -0.53
SRSF4-204ENST00000489898 TNFP01375 233 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 JCHAINP01591 159 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 KRT1P04264 644 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 PRB1P04280 392 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 ITGA2BP08514 1039 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 PNLIPP16233 465 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 PTMSP20962 102 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 PTPN3P26045 913 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 ACTN2P35609 894 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 ARHGAP25P42331 645 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 GNPDA1P46926 289 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 SPINT3P49223 89 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 RPL26P61254 145 aaKnown RBP11.75□□□□□ -0.53
SRSF4-204ENST00000489898 SPIDRQ14159 915 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 GALNT3Q14435 633 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 NOMO1Q15155 1222 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 RAET1GQ6H3X3 334 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 KDELC1Q6UW63 502 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 RHOT2Q8IXI1 618 aa11.75□□□□□ -0.53
SRSF4-204ENST00000489898 RAVER1Q8IY67 606 aaKnown RBP11.75□□□□□ -0.53
SRSF4-204ENST00000489898 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.75□□□□□ -0.53
SRSF4-204ENST00000489898 KCTD6Q8NC69 237 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms