RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 DNAJC28Q9NX36 388 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 NDE1Q9NXR1 346 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 KCTD5Q9NXV2 234 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 OBP2AQ9NY56 170 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 KLHL42Q9P2K6 505 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 GDF2Q9UK05 429 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ATXN7L1Q9ULK2 861 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 PCDHB1Q9Y5F3 818 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 SLC30A1Q9Y6M5 507 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 WDFY4Q6ZS81 3184 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 MYO16Q9Y6X6 1858 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 A0A0D9SEW6 157 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 HMX2A2RU54 273 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 RGSL1A5PLK6 1076 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 F5H423 210 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 LEFTY2O00292 366 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 EIF3FO00303 357 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 OIP5O43482 229 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 LDB2O43679 373 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 NPHS1O60500 1241 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 SMIM24O75264 130 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 VPS26AO75436 327 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 TMCC1O94876 653 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 HAUS5O94927 633 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 PAPLNO95428 1278 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 HSPA4LO95757 839 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 AHSGP02765 367 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 ESR1P03372 595 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 SERPINA6P08185 405 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 MMP2P08253 660 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 ATXN1LP0C7T5 689 aaKnown RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 TPBGLP0DKB5 382 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 IRF1P10914 325 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 CYP2A6P11509 494 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 ZNF30P17039 623 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 BGNP21810 368 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 ACVRL1P37023 503 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 SLC1A2P43004 574 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 MAPK9P45984 424 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 CSRP3P50461 194 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 STC1P52823 247 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 ABCE1P61221 599 aaKnown RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 MAXP61244 160 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 CACNG1Q06432 222 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 VAC14Q08AM6 782 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 BST1Q10588 318 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 CDC16Q13042 620 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 TYSND1Q2T9J0 566 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 PLEKHG6Q3KR16 790 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 GALNTL6Q49A17 601 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 DNAL1Q4LDG9 190 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 GPR158Q5T848 1215 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 C6orf163Q5TEZ5 329 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 MBLAC2Q68D91 279 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 TXNDC8Q6A555 127 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 GRAMD4Q6IC98 578 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 CXorf57Q6NSI4 855 aaKnown RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 ESRP1Q6NXG1 681 aaKnown RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 METTL2BQ6P1Q9 378 aaKnown RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 TTC23LQ6PF05 361 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 NCEH1Q6PIU2 408 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 FIGNL1Q6PIW4 674 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 TXNDC11Q6PKC3 985 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 ACAD11Q709F0 780 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 USP45Q70EL2 814 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 GAREM2Q75VX8 874 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 TMEM150AQ86TG1 271 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 TMC8Q8IU68 726 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 AHI1Q8N157 1196 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 CFAP52Q8N1V2 620 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 SLC25A41Q8N5S1 370 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 CELF5Q8N6W0 485 aaKnown RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 GPATCH11Q8N954 259 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 SPPL3Q8TCT6 385 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 BLOC1S5Q8TDH9 187 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 POF1BQ8WVV4 589 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 C10orf82Q8WW14 230 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 HDAC10Q969S8 669 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 ULK4Q96C45 1275 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 KLHL29Q96CT2 875 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 CMTM5Q96DZ9 223 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 PRICKLE1Q96MT3 831 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 RILPQ96NA2 401 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 TRIB3Q96RU7 358 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 LYSMD1Q96S90 227 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 KLF6Q99612 283 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 CCT7Q99832 543 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 CORO1BQ9BR76 489 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 OSBPL1AQ9BXW6 950 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 LRRC3Q9BY71 257 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 RABEP2Q9H5N1 569 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 RUBCNLQ9H714 662 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 NOD2Q9HC29 1040 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 NPHS2Q9NP85 383 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 C11orf16Q9NQ32 467 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 GKN1Q9NS71 199 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 TDP1Q9NUW8 608 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 OXSMQ9NWU1 459 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 THG1LQ9NWX6 298 aaKnown RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 MARK1Q9P0L2 795 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms