RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 TYSND1Q2T9J0 566 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 INO80DQ53TQ3 878 aaPredicted RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 SIRPB2Q5JXA9 342 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 TMEM164Q5U3C3 297 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 SDHAF4Q5VUM1 108 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 SEL1L3Q68CR1 1132 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 NADSYN1Q6IA69 706 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ANKRD54Q6NXT1 300 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ZCCHC23Q6ZST2 131 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 EP400NLQ6ZTU2 488 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ACAD11Q709F0 780 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 NET1Q7Z628 596 aaPredicted RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 SDCCAG8Q86SQ7 713 aaPredicted RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ITIH5Q86UX2 942 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ALYREFQ86V81 257 aaKnown RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 TCEAL8Q8IYN2 117 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 CENPLQ8N0S6 344 aaPredicted RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 LGI2Q8N0V4 545 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 PLD6Q8N2A8 252 aaKnown RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 CPSF7Q8N684 471 aaKnown RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 SMRP1Q8NCR6 262 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 OR13J1Q8NGT2 312 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 RHBDD1Q8TEB9 315 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 AGAP11Q8TF27 550 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 STMN2Q93045 179 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ZNF512Q96ME7 567 aaPredicted RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 GPR78Q96P69 363 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 NECAB3Q96P71 396 aaPredicted RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 MIPEPQ99797 713 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 GATA5Q9BWX5 397 aaPredicted RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ADGRE3Q9BY15 652 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 CADM1Q9BY67 442 aaKnown RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 NACA2Q9H009 215 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 CLDND1Q9NY35 253 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 STOML1Q9UBI4 398 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 DPP7Q9UHL4 492 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 NUDT5Q9UKK9 219 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 TMCO1Q9UM00 188 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ASB3Q9Y575 518 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 COMMD10Q9Y6G5 202 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 NUMBLQ9Y6R0 609 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 B2RBV5 119 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 H3BQ06 376 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 HGSO14964 777 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 PEX11AO75192 247 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 RPP40O75818 363 aaKnown RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 CIB2O75838 187 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 LUC7L3O95232 432 aaKnown RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 WISP3O95389 354 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 TOP3BO95985 862 aaKnown RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 THRAP10827 490 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 HMGA1P17096 107 aaKnown RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 CR2P20023 1033 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 GLDCP23378 1020 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 HOXD9P28356 352 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 HOXA9P31269 272 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 OR1D2P34982 312 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 PGM1P36871 562 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 MAPK8P45983 427 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 GRIA4P48058 902 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 ARPP19P56211 112 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 TAS2R39P59534 338 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 RPL26P61254 145 aaKnown RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 IRX4P78413 519 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 FOXK2Q01167 660 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 PFKPQ01813 784 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 DSC2Q02487 901 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 ZNF177Q13360 481 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 CTBP1Q13363 440 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 TAF1AQ15573 450 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 PCSK7Q16549 785 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 MPP7Q5T2T1 576 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 AAGABQ6PD74 315 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 ZNF354CQ86Y25 554 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 DENND6AQ8IWF6 608 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 CHCHD4Q8N4Q1 142 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 TDRD5Q8NAT2 981 aaKnown RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 RHEBL1Q8TAI7 183 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 JADE3Q92613 823 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 ATXN7L3BQ96GX2 97 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 RSRC1Q96IZ7 334 aaKnown RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 ELMO2Q96JJ3 720 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 TRIB3Q96RU7 358 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 OMDQ99983 421 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 SEMA3CQ99985 751 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 CINPQ9BW66 212 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 CRISPLD1Q9H336 500 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 IGFLR1Q9H665 355 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 CCSER2Q9H7U1 834 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 COG4Q9H9E3 785 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 CAB39LQ9H9S4 337 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 SYTL2Q9HCH5 934 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 GPAMQ9HCL2 828 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 CD248Q9HCU0 757 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 TCF7L2Q9NQB0 619 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 IL1RAPL1Q9NZN1 696 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms