RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 OR2W1Q9Y3N9 320 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 LSM4Q9Y4Z0 139 aaKnown RBP3.27□□□□□ -1.89
CBWD1-216ENST00000489272 BLOC1S5-TXNDC5H3BN57 136 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 PCDH7O60245 1069 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 GUCY1B2O75343 617 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 TACC1O75410 805 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 TFP02787 698 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 SHMT1P34896 483 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 NOVP48745 357 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 MMP14P50281 582 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 EFNA5P52803 228 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 ISL1P61371 349 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 SFMBT2Q5VUG0 894 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 ATG16L1Q676U5 607 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 ARHGAP17Q68EM7 881 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 KRTAP7-1Q8IUC3 87 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 SPATA6LQ8N4H0 392 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 ZNF524Q96C55 264 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 ZNF354BQ96LW1 612 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 HINT3Q9NQE9 182 aaKnown RBP3.26□□□□□ -1.89
CBWD1-216ENST00000489272 MAP3K20Q9NYL2 800 aaKnown RBP3.26□□□□□ -1.89
CBWD1-216ENST00000489272 ERVK-11Q9UQG0 969 aa3.26□□□□□ -1.89
CBWD1-216ENST00000489272 COL2A1P02458 1487 aaPredicted RBP3.26□□□□□ -1.89
CBWD1-216ENST00000489272 CCDC194A0A1B0GVG4 234 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 ZNF500O60304 480 aaPredicted RBP3.25□□□□□ -1.89
CBWD1-216ENST00000489272 URODP06132 367 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 PATE4P0C8F1 98 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 TRAPPC10P48553 1259 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 DRG2P55039 364 aaKnown RBP3.25□□□□□ -1.89
CBWD1-216ENST00000489272 SORDQ00796 357 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 RNPS1Q15287 305 aaKnown RBP3.25□□□□□ -1.89
CBWD1-216ENST00000489272 C2orf68Q2NKX9 166 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 ZNF766Q5HY98 468 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 TXNDC8Q6A555 127 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 TTI2Q6NXR4 508 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 SLC27A1Q6PCB7 646 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 RRM2BQ7LG56 351 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 TM9SF4Q92544 642 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 PIGTQ969N2 578 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 TBC1D20Q96BZ9 403 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 ST6GAL2Q96JF0 529 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 QRFPRQ96P65 431 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 NEURL2Q9BR09 285 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 FSD1Q9BTV5 496 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 HEMGNQ9BXL5 484 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 UPF2Q9HAU5 1272 aaKnown RBP3.25□□□□□ -1.89
CBWD1-216ENST00000489272 ITM2CQ9NQX7 267 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 HCN3Q9P1Z3 774 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 CNOT7Q9UIV1 285 aaKnown RBP3.25□□□□□ -1.89
CBWD1-216ENST00000489272 KCNK7Q9Y2U2 307 aa3.25□□□□□ -1.89
CBWD1-216ENST00000489272 CACNA1FO60840 1977 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 ZNHIT1O43257 154 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 IGHV4-39P01824 125 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 PGM1P36871 562 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 CDH15P55291 814 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 CSNK2A1P68400 391 aaPredicted RBP3.24□□□□□ -1.89
CBWD1-216ENST00000489272 TDGQ13569 410 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 SLC1A5Q15758 541 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 NFIL3Q16649 462 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 TMEM35AQ53FP2 167 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 ZC2HC1BQ5TFG8 222 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 DUS1LQ6P1R4 473 aaKnown RBP3.24□□□□□ -1.89
CBWD1-216ENST00000489272 SLC22A25Q6T423 547 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 ATF7IPQ6VMQ6 1270 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 ZNF497Q6ZNH5 498 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 BBS12Q6ZW61 710 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 PCDH20Q8N6Y1 951 aaKnown RBP3.24□□□□□ -1.89
CBWD1-216ENST00000489272 SPATA5Q8NB90 893 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 CSNK2A3Q8NEV1 391 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 SCRN2Q96FV2 425 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 FAM110AQ9BQ89 295 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 H2AFJQ9BTM1 129 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 INTS2Q9H0H0 1204 aaKnown RBP3.24□□□□□ -1.89
CBWD1-216ENST00000489272 TTYH1Q9H313 450 aaPredicted RBP3.24□□□□□ -1.89
CBWD1-216ENST00000489272 ZNF624Q9P2J8 865 aaPredicted RBP3.24□□□□□ -1.89
CBWD1-216ENST00000489272 HSPB7Q9UBY9 170 aa3.24□□□□□ -1.89
CBWD1-216ENST00000489272 PTPRCP08575 1304 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 IGLV5-45A0A087WSX0 123 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 GAGE10A6NGK3 116 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 EXTL3O43909 919 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 POLR2CP19387 275 aaPredicted RBP3.23□□□□□ -1.89
CBWD1-216ENST00000489272 PSMC2P35998 433 aaKnown RBP3.23□□□□□ -1.89
CBWD1-216ENST00000489272 DCTP40126 519 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 FASLGP48023 281 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 AMPHP49418 695 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 UBE3AQ05086 875 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 FOXM1Q08050 763 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 NAE1Q13564 534 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 FRG2Q64ET8 278 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 OR7E24Q6IFN5 339 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 FAM171BQ6P995 826 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 LRRC8DQ7L1W4 858 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 SLC46A3Q7Z3Q1 461 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 SRBD1Q8N5C6 995 aaKnown RBP3.23□□□□□ -1.89
CBWD1-216ENST00000489272 SLC38A5Q8WUX1 472 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 ANKRD9Q96BM1 317 aaPredicted RBP3.23□□□□□ -1.89
CBWD1-216ENST00000489272 STAMBPL1Q96FJ0 436 aa3.23□□□□□ -1.89
CBWD1-216ENST00000489272 IFIH1Q9BYX4 1025 aaKnown RBP3.23□□□□□ -1.89
CBWD1-216ENST00000489272 TKTL2Q9H0I9 626 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms