RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 TRIM74Q86UV6 250 aa13.32□□□□□ -0.28
CHD1L-208ENST00000488864 TRIM73Q86UV7 250 aa13.32□□□□□ -0.28
CHD1L-208ENST00000488864 MCUQ8NE86 351 aa13.32□□□□□ -0.28
CHD1L-208ENST00000488864 LRRC39Q96DD0 335 aa13.32□□□□□ -0.28
CHD1L-208ENST00000488864 UBE2ZQ9H832 354 aaPredicted RBP13.32□□□□□ -0.28
CHD1L-208ENST00000488864 ZNF358Q9NW07 568 aa13.32□□□□□ -0.28
CHD1L-208ENST00000488864 PIH1D1Q9NWS0 290 aaKnown RBP13.32□□□□□ -0.28
CHD1L-208ENST00000488864 PSMD13Q9UNM6 376 aa13.32□□□□□ -0.28
CHD1L-208ENST00000488864 PSAT1Q9Y617 370 aa13.32□□□□□ -0.28
CHD1L-208ENST00000488864 GRXCR2A6NFK2 248 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 E9PBE3 544 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 CBX4O00257 560 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 KLHL41O60662 606 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 TYRP14679 529 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 ALOX15P16050 662 aaPredicted RBP13.31□□□□□ -0.28
CHD1L-208ENST00000488864 ETFBP38117 255 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 ABCE1P61221 599 aaKnown RBP13.31□□□□□ -0.28
CHD1L-208ENST00000488864 KLF10Q13118 480 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 SERINC3Q13530 473 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 SLC9B1Q4ZJI4 515 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 ZNF567Q8N184 647 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 PPP4R1Q8TF05 950 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 OSCP1Q8WVF1 389 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 SP110Q9HB58 689 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 ATP13A1Q9HD20 1204 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 RAD54BQ9Y620 910 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 SNAP91O60641 907 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 GLRA3O75311 464 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 PTPN3P26045 913 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 CSKP41240 450 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 DHCR24Q15392 516 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 PARP15Q460N3 678 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 TMEM259Q4ZIN3 620 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 LINGO4Q6UY18 593 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 PACS1Q6VY07 963 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 PID1Q7Z2X4 250 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 SETD3Q86TU7 594 aaPredicted RBP13.31□□□□□ -0.28
CHD1L-208ENST00000488864 APCDD1Q8J025 514 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 MAPK15Q8TD08 544 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 COG4Q9H9E3 785 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 KLHL8Q9P2G9 620 aaPredicted RBP13.31□□□□□ -0.28
CHD1L-208ENST00000488864 VPS28Q9UK41 221 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 AP4B1Q9Y6B7 739 aa13.31□□□□□ -0.28
CHD1L-208ENST00000488864 A0A0J9YVX5 310 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 A0A1B0GTW7 788 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 AIM2O14862 343 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 RALBP11234 206 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 CDK4P11802 303 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 TCF3P15923 654 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 CCNCP24863 283 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 CD70P32970 193 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 YBEYP58557 167 aaPredicted RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 CDKL1Q00532 357 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 CNGA3Q16281 694 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 DBN1Q16643 649 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 EML3Q32P44 896 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 HABP4Q5JVS0 413 aaKnown RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 C6orf52Q5T4I8 152 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 SUSD6Q92537 303 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 LENG8Q96PV6 779 aaPredicted RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 FEM1AQ9BSK4 669 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 MAGEH1Q9H213 219 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 ABCB8Q9NUT2 735 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 C6orf203Q9P0P8 240 aaPredicted RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 NUP210Q8TEM1 1887 aaPredicted RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 A0A0A0MRY4 1105 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 ILVBLA1L0T0 632 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 SLC9A3R1O14745 358 aaPredicted RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 ZBTB24O43167 697 aaPredicted RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 PFDN1O60925 122 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 CYP17A1P05093 508 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 F7P08709 466 aaPredicted RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 HLA-FP30511 346 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 MRPS22P82650 360 aaKnown RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 NIPAL4Q0D2K0 466 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 SLC10A7Q0GE19 358 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 LMAN2Q12907 356 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 ASTLQ6HA08 431 aaPredicted RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 CNTD1Q8N815 330 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 ZNF781Q8N8C0 355 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 AGR3Q8TD06 166 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 SPATA13Q96N96 652 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 TSGA13Q96PP4 275 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 PRPF18Q99633 342 aaKnown RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 RTKNQ9BST9 563 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 MRPS26Q9BYN8 205 aaKnown RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 COPS7BQ9H9Q2 264 aaPredicted RBP13.3□□□□□ -0.28
CHD1L-208ENST00000488864 TRPV4Q9HBA0 871 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 GTSE1Q9NYZ3 720 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 COPG2Q9UBF2 871 aa13.3□□□□□ -0.28
CHD1L-208ENST00000488864 MATN3O15232 486 aa13.29□□□□□ -0.28
CHD1L-208ENST00000488864 PEX11BO96011 259 aa13.29□□□□□ -0.28
CHD1L-208ENST00000488864 SERPINB5P36952 375 aa13.29□□□□□ -0.28
CHD1L-208ENST00000488864 ATXN3P54252 364 aaPredicted RBP13.29□□□□□ -0.28
CHD1L-208ENST00000488864 MAXP61244 160 aa13.29□□□□□ -0.28
CHD1L-208ENST00000488864 MPP7Q5T2T1 576 aa13.29□□□□□ -0.28
CHD1L-208ENST00000488864 CASC4Q6P4E1 433 aa13.29□□□□□ -0.28
CHD1L-208ENST00000488864 EPGNQ6UW88 154 aa13.29□□□□□ -0.28
CHD1L-208ENST00000488864 NAPRTQ6XQN6 538 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms