RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 MPP3Q13368 585 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 SEMA5AQ13591 1074 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 PTPRRQ15256 657 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 PACS2Q86VP3 889 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 AGGF1Q8N302 714 aaeCLIP19.37■□□□□ 0.69
CCM2-216ENST00000488727 PAF1Q8N7H5 531 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 IPMKQ8NFU5 416 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 GPR174Q9BXC1 333 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 ARL2BPQ9Y2Y0 163 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 FADS3Q9Y5Q0 445 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 R4GN57 208 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 LRRK1Q38SD2 2015 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 IQANK1A0A1B0GTG1 560 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 DNAJC8O75937 253 aaPredicted RBP19.37■□□□□ 0.69
CCM2-216ENST00000488727 ANXA9O76027 345 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 SEMA4FO95754 770 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 C1QAP02745 245 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 RPA3P35244 121 aaPredicted RBP19.37■□□□□ 0.69
CCM2-216ENST00000488727 GEMP55040 296 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 SEMG2Q02383 582 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 CDK18Q07002 472 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 OLIG2Q13516 323 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 GALNT3Q14435 633 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 CGB2Q6NT52 195 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 LPCAT1Q8NF37 534 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 RAB7BQ96AH8 199 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 PCDH12Q9NPG4 1184 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 PHTF1Q9UMS5 762 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 SLC12A4Q9UP95 1085 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 MUC6Q6W4X9 2439 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 A0A1W2PQ67 120 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 C10orf142B7Z368 130 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 TM9SF1O15321 606 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 KRT4P19013 534 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 CNR2P34972 360 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 POLR2LP62875 67 aaKnown RBP19.36■□□□□ 0.69
CCM2-216ENST00000488727 CCDC15Q0P6D6 951 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 PRPSAP1Q14558 356 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 SYCP2LQ5T4T6 812 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 KCTD11Q693B1 232 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 ZNF534Q76KX8 674 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 FEM1CQ96JP0 617 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 C6orf106Q9H6K1 298 aaPredicted RBP19.36■□□□□ 0.69
CCM2-216ENST00000488727 XAB2Q9HCS7 855 aaKnown RBP19.36■□□□□ 0.69
CCM2-216ENST00000488727 ZNF180Q9UJW8 692 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 AAR2Q9Y312 384 aaKnown RBP19.36■□□□□ 0.69
CCM2-216ENST00000488727 MYO15AQ9UKN7 3530 aa19.36■□□□□ 0.69
CCM2-216ENST00000488727 LOC285095A0A1B0GVY8 99 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 PRR23AA6NEV1 266 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 AP1G1O43747 822 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 ALPIP09923 528 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 ATXN1LP0C7T5 689 aaKnown RBP19.35■□□□□ 0.69
CCM2-216ENST00000488727 CTPS1P17812 591 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 XPAP23025 273 aaPredicted RBP19.35■□□□□ 0.69
CCM2-216ENST00000488727 ADRA1AP35348 466 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 FDFT1P37268 417 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 RPL6Q02878 288 aaKnown RBP19.35■□□□□ 0.69
CCM2-216ENST00000488727 SLC1A5Q15758 541 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 DEFB119Q8N690 84 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 PDCD7Q8N8D1 485 aaKnown RBP19.35■□□□□ 0.69
CCM2-216ENST00000488727 BANPQ8N9N5 519 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 OR2T34Q8NGX1 318 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 MRRFQ96E11 262 aaKnown RBP19.35■□□□□ 0.69
CCM2-216ENST00000488727 IFT43Q96FT9 208 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 PPIL1Q9Y3C6 166 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 ARIH1Q9Y4X5 557 aaPredicted RBP19.35■□□□□ 0.69
CCM2-216ENST00000488727 TRPM6Q9BX84 2022 aa19.35■□□□□ 0.69
CCM2-216ENST00000488727 A0A0J9YYE9 177 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 H0YHG0 523 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 NDUFS2O75306 463 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 TRBC1P01850 177 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 APRTP07741 180 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 MMP12P39900 470 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 CHRNA4P43681 627 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 RPL26P61254 145 aaKnown RBP19.34■□□□□ 0.69
CCM2-216ENST00000488727 PPP2CBP62714 309 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 PPP2CAP67775 309 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 CDK16Q00536 496 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 ZKSCAN8Q15776 578 aaPredicted RBP19.34■□□□□ 0.69
CCM2-216ENST00000488727 KBTBD12Q3ZCT8 623 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 SLC36A4Q6YBV0 504 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 GBP7Q8N8V2 638 aaPredicted RBP19.34■□□□□ 0.69
CCM2-216ENST00000488727 PPP1R2P1Q96PQ5 205 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 MCCC1Q96RQ3 725 aaPredicted RBP19.34■□□□□ 0.69
CCM2-216ENST00000488727 FICDQ9BVA6 458 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 FSD1LQ9BXM9 530 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 EIF2B3Q9NR50 452 aaKnown RBP19.34■□□□□ 0.69
CCM2-216ENST00000488727 B4GALT6Q9UBX8 382 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 ZC3H7BQ9UGR2 993 aaKnown RBP19.34■□□□□ 0.69
CCM2-216ENST00000488727 RPL26L1Q9UNX3 145 aaKnown RBP19.34■□□□□ 0.69
CCM2-216ENST00000488727 TNRC6BQ9UPQ9 1833 aaKnown RBP19.34■□□□□ 0.69
CCM2-216ENST00000488727 TBC1D3DA0A087WVF3 549 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 TBC1D3IA0A087WXS9 549 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 TBC1D3EA0A087X179 549 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 TBC1D3KA0A087X1G2 549 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 A0A0U1RQS6 177 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 TBC1D3FA6NER0 549 aaPredicted RBP19.34■□□□□ 0.69
CCM2-216ENST00000488727 NPIPB15A6NHN6 443 aaPredicted RBP19.34■□□□□ 0.69
CCM2-216ENST00000488727 LRRC72A6NJI9 287 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms