RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 SIGIRRQ6IA17 410 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 GLDNQ6ZMI3 551 aaPredicted RBP3.28□□□□□ -1.88
CD46-215ENST00000488596 PQLC2Q6ZP29 291 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.28□□□□□ -1.88
CD46-215ENST00000488596 RBM23Q86U06 439 aaKnown RBP3.28□□□□□ -1.88
CD46-215ENST00000488596 CUZD1Q86UP6 607 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 NR2C2APQ86WQ0 139 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 OR14A16Q8NHC5 309 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 WFIKKN2Q8TEU8 576 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 POMGNT1Q8WZA1 660 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 NR4A3Q92570 626 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 ARHGEF26Q96DR7 871 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 MED30Q96HR3 178 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 LRFN5Q96NI6 719 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 CSF3RQ99062 836 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 SRSF8Q9BRL6 282 aaKnown RBP3.28□□□□□ -1.88
CD46-215ENST00000488596 SLC25A33Q9BSK2 321 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 HAUS8Q9BT25 410 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 SF3B5Q9BWJ5 86 aaKnown RBP3.28□□□□□ -1.88
CD46-215ENST00000488596 SH2D4AQ9H788 454 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 SYNCQ9H7C4 482 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 CNGB3Q9NQW8 809 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 VPS28Q9UK41 221 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 PAM16Q9Y3D7 125 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 MAU2Q9Y6X3 613 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 EVPLQ92817 2033 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 A0A087WYN8 130 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 hCG_1807616A0A1W2PRN6 198 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 LINC01553A4QN01 128 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 AGAP14A8MT82 685 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 AHCYL1O43865 530 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 SERPINI2O75830 405 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 CH25HO95992 272 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 IGKV3-20P01619 116 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 HOXC6P09630 235 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 CDH2P19022 906 aaPredicted RBP3.27□□□□□ -1.89
CD46-215ENST00000488596 CD58P19256 250 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 GPTP24298 496 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 C21orf33P30042 268 aaPredicted RBP3.27□□□□□ -1.89
CD46-215ENST00000488596 SSTR2P30874 369 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 STX2P32856 288 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 PIK3CAP42336 1068 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 NLRP5P59047 1200 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 PRAMEP78395 509 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 BNC1Q01954 994 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 DDR1Q08345 913 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 PRKG2Q13237 762 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 TOMM20Q15388 145 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 DUSP28Q4G0W2 176 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 TDRD12Q587J7 1177 aaKnown RBP3.27□□□□□ -1.89
CD46-215ENST00000488596 RILPL1Q5EBL4 403 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 TMEM198Q66K66 360 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 PLEKHA7Q6IQ23 1121 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 PDXDC1Q6P996 788 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 SARM1Q6SZW1 724 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 SLC36A4Q6YBV0 504 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 SZRD1Q7Z422 152 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 FJX1Q86VR8 437 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 TMPRSS12Q86WS5 348 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 FOXRED2Q8IWF2 684 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 C17orf53Q8N3J3 647 aaPredicted RBP3.27□□□□□ -1.89
CD46-215ENST00000488596 HJURPQ8NCD3 748 aaPredicted RBP3.27□□□□□ -1.89
CD46-215ENST00000488596 HMGCLL1Q8TB92 370 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 FAM120BQ96EK7 910 aaKnown RBP3.27□□□□□ -1.89
CD46-215ENST00000488596 RRNAD1Q96FB5 475 aaKnown RBP3.27□□□□□ -1.89
CD46-215ENST00000488596 ELMOD3Q96FG2 381 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 NEUROD6Q96NK8 337 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 ACOX2Q99424 681 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 KXD1Q9BQD3 176 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 PCGF1Q9BSM1 259 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 IFIH1Q9BYX4 1025 aaKnown RBP3.27□□□□□ -1.89
CD46-215ENST00000488596 PPP1R3EQ9H7J1 279 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 NOX4Q9NPH5 578 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 SETD4Q9NVD3 440 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 TTC7AQ9ULT0 858 aaPredicted RBP3.27□□□□□ -1.89
CD46-215ENST00000488596 MYO6Q9UM54 1294 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 NENFQ9UMX5 172 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 PCDHGB4Q9UN71 923 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 MTMR6Q9Y217 621 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 SLC45A1Q9Y2W3 748 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 SNX9Q9Y5X1 595 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 ARHGEF40Q8TER5 1519 aa3.27□□□□□ -1.89
CD46-215ENST00000488596 A0A1W2PQ09 198 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 NDUFS7O75251 213 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 NDUFS3O75489 264 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 JRKO75564 520 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 KCNK5O95279 499 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 PORP16435 677 aaPredicted RBP3.26□□□□□ -1.89
CD46-215ENST00000488596 GABRB1P18505 474 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 MAOAP21397 527 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 GCH1P30793 250 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 ACSL1P33121 698 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 CRYZQ08257 329 aaKnown RBP3.26□□□□□ -1.89
CD46-215ENST00000488596 CDC16Q13042 620 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 IKQ13123 557 aaPredicted RBP3.26□□□□□ -1.89
CD46-215ENST00000488596 CUL4AQ13619 759 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 PDE1CQ14123 709 aaPredicted RBP3.26□□□□□ -1.89
CD46-215ENST00000488596 WTAPQ15007 396 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 KRT24Q2M2I5 525 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 GFI1BQ5VTD9 330 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms