RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 SLC41A1Q8IVJ1 513 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 PDIK1LQ8N165 341 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 PPHLN1Q8NEY8 458 aaKnown RBP10.28□□□□□ -0.76
SKA1-204ENST00000488454 SKA1Q96BD8 255 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 NUS1Q96E22 293 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 LOXL4Q96JB6 756 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 LENG8Q96PV6 779 aaPredicted RBP10.28□□□□□ -0.76
SKA1-204ENST00000488454 HINFPQ9BQA5 517 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 IL22Q9GZX6 179 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 CDH19Q9H159 772 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 FAM83DQ9H4H8 585 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 EPB41L5Q9HCM4 733 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 BPIFA1Q9NP55 256 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 AASDHPPTQ9NRN7 309 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 SAMD15Q9P1V8 674 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 EIF2B4Q9UI10 523 aaKnown RBP10.28□□□□□ -0.76
SKA1-204ENST00000488454 COQ6Q9Y2Z9 468 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 SPO11Q9Y5K1 396 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 A0A0U1RQS6 177 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 HEATR9A2RTY3 570 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 PRR5-ARHGAP8B1AHC4 643 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 AURKAO14965 403 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 MGAT1P26572 445 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 HADHAP40939 763 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 ETV3P41162 512 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 PTGER3P43115 390 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 ARL4CP56559 192 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 CREB5Q02930 508 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 LPAL2Q16609 132 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 SKIDA1Q1XH10 827 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 ZNF787Q6DD87 383 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 IFT20Q8IY31 132 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 CBARPQ8N350 705 aaPredicted RBP10.27□□□□□ -0.77
SKA1-204ENST00000488454 DENND6BQ8NEG7 585 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 STYXQ8WUJ0 223 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 IFT81Q8WYA0 676 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 DNASE2BQ8WZ79 361 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 PIGKQ92643 395 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 DTD2Q96FN9 168 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 COQ10AQ96MF6 247 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 SERPINB12Q96P63 405 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 RANBP9Q96S59 729 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 MYOCQ99972 504 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 EPC1Q9H2F5 836 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 FAM114A2Q9NRY5 505 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 SUSD2Q9UGT4 822 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 HS3ST3A1Q9Y663 406 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 ARL5AQ9Y689 179 aa10.27□□□□□ -0.77
SKA1-204ENST00000488454 BCAT2O15382 392 aaPredicted RBP10.26□□□□□ -0.77
SKA1-204ENST00000488454 BUD23O43709 281 aaKnown RBP10.26□□□□□ -0.77
SKA1-204ENST00000488454 MAGEC1O60732 1142 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 AVILO75366 819 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 TMEM63AO94886 807 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 PCCBP05166 539 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 PYGLP06737 847 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 C1SP09871 688 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 RHOXF2BP0C7M4 288 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 ITPKAP23677 461 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 GPR1P46091 355 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 PLTPP55058 493 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 RACK1P63244 317 aaKnown RBP10.26□□□□□ -0.77
SKA1-204ENST00000488454 TMPRSS15P98073 1019 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 MSLNQ13421 630 aaPredicted RBP10.26□□□□□ -0.77
SKA1-204ENST00000488454 MTM1Q13496 603 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 FGL2Q14314 439 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 TEAD4Q15561 434 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 WSCD2Q2TBF2 565 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 CCDC38Q502W7 563 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 TEX35Q5T0J7 233 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 ARMC3Q5W041 872 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 ALS2CLQ60I27 953 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 ZNF765Q7L2R6 523 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 VASH1Q7L8A9 365 aaPredicted RBP10.26□□□□□ -0.77
SKA1-204ENST00000488454 TECPR1Q7Z6L1 1165 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 RABEPKQ7Z6M1 372 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 CAND1Q86VP6 1230 aaKnown RBP10.26□□□□□ -0.77
SKA1-204ENST00000488454 NLRP8Q86W28 1048 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 SYT12Q8IV01 421 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 TTC30BQ8N4P2 665 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 OR4K2Q8NGD2 314 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 CEP76Q8TAP6 659 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 AP2M1Q96CW1 435 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 C19orf43Q9BQ61 176 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 RHOXF2Q9BQY4 288 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 SPATA16Q9BXB7 569 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 ABCG8Q9H221 673 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 FZD3Q9NPG1 666 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 IL17CQ9P0M4 197 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 CD84Q9UIB8 345 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 GMEB2Q9UKD1 530 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 APPL1Q9UKG1 709 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 SMG5Q9UPR3 1016 aaKnown RBP10.26□□□□□ -0.77
SKA1-204ENST00000488454 FNDC3AQ9Y2H6 1198 aaKnown RBP10.26□□□□□ -0.77
SKA1-204ENST00000488454 PCDHGA5Q9Y5G8 931 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 MAD1L1Q9Y6D9 718 aa10.26□□□□□ -0.77
SKA1-204ENST00000488454 KMT2EQ8IZD2 1858 aa10.25□□□□□ -0.77
SKA1-204ENST00000488454 A0A1B0GTW7 788 aa10.25□□□□□ -0.77
SKA1-204ENST00000488454 CCDC78A2IDD5 438 aa10.25□□□□□ -0.77
SKA1-204ENST00000488454 TOR1BO14657 336 aa10.25□□□□□ -0.77
SKA1-204ENST00000488454 CAPN5O15484 640 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms