RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 LYSMD1Q96S90 227 aa23.64■■□□□ 1.37
RNF38-208ENST00000488058 AGAP2Q99490 1192 aa23.64■■□□□ 1.37
RNF38-208ENST00000488058 RIOK2Q9BVS4 552 aaKnown RBP23.64■■□□□ 1.37
RNF38-208ENST00000488058 TRIM10Q9UDY6 481 aa23.64■■□□□ 1.37
RNF38-208ENST00000488058 AK5Q9Y6K8 562 aa23.64■■□□□ 1.37
RNF38-208ENST00000488058 CCDC66A2RUB6 948 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 GRID2IPA4D2P6 1211 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 H7C0C1 242 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 TAF4O00268 1085 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 INPP4BO15327 924 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 PMPCBO75439 489 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 SOD1P00441 154 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 CAPNS1P04632 268 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 CEACAM5P06731 702 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 PIRTP0C851 137 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 CTNNA2P26232 953 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 TEAD1P28347 426 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 ATP5OP48047 213 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 POLD2P49005 469 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 CDK18Q07002 472 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 KIF5AQ12840 1032 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 ZNF765Q7L2R6 523 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 LYSMD3Q7Z3D4 306 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 TRIM74Q86UV6 250 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 NRSN1Q8IZ57 195 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 TXLNBQ8N3L3 684 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 DCBLD1Q8N8Z6 715 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 FAM46DQ8NEK8 389 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 DEPDC7Q96QD5 511 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 FRMD8Q9BZ67 464 aaPredicted RBP23.63■■□□□ 1.37
RNF38-208ENST00000488058 PKD2L2Q9NZM6 624 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 SUFUQ9UMX1 484 aa23.63■■□□□ 1.37
RNF38-208ENST00000488058 B4DGG1 531 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 MTSS1O43312 755 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 NFKB1P19838 968 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 RWDD2BP57060 319 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 COPS2P61201 443 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 WASHC5Q12768 1159 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 CCDC70Q6NSX1 233 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 ADAMTSL4Q6UY14 1074 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 PID1Q7Z2X4 250 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 PTCD2Q8WV60 388 aaKnown RBP23.62■■□□□ 1.37
RNF38-208ENST00000488058 HTR3CQ8WXA8 447 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 QKIQ96PU8 341 aaKnown RBP eCLIP23.62■■□□□ 1.37
RNF38-208ENST00000488058 TRIB3Q96RU7 358 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 CCDC3Q9BQI4 270 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 DPEP2Q9H4A9 486 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 SHOC2Q9UQ13 582 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 TMEM98Q9Y2Y6 226 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 IGF2RP11717 2491 aa23.62■■□□□ 1.37
RNF38-208ENST00000488058 A0A0U1RQJ8 604 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 APOC4-APOC2K7ER74 178 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 CSO75390 466 aaKnown RBP23.61■■□□□ 1.37
RNF38-208ENST00000488058 APOC2P02655 101 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 PYGLP06737 847 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 CETN2P41208 172 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 SPINT3P49223 89 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 CDCP2Q5VXM1 449 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 MARK2Q7KZI7 788 aaKnown RBP23.61■■□□□ 1.37
RNF38-208ENST00000488058 LRRC57Q8N9N7 239 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 HIC2Q96JB3 615 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 HERPUD2Q9BSE4 406 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 OSBPL8Q9BZF1 889 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 C10orf88Q9H8K7 445 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 ZFYVE1Q9HBF4 777 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 AMFRQ9UKV5 643 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 PCDHB1Q9Y5F3 818 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 EPG5Q9HCE0 2579 aa23.61■■□□□ 1.37
RNF38-208ENST00000488058 USP24Q9UPU5 2620 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 HACD1B0YJ81 288 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 ASMTLO95671 621 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 FUCA1P04066 466 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 CD68P34810 354 aaPredicted RBP23.6■■□□□ 1.37
RNF38-208ENST00000488058 ILF3Q12906 894 aaKnown RBP eCLIP23.6■■□□□ 1.37
RNF38-208ENST00000488058 ALS2CLQ60I27 953 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 AADACL2Q6P093 401 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 PEX26Q7Z412 305 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 ZNF567Q8N184 647 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 CACTIN-AS1Q8N1I8 211 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 CCDC74AQ96AQ1 378 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 TADA1Q96BN2 335 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 GSDMCQ9BYG8 508 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 GPR63Q9BZJ6 419 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 FAM83DQ9H4H8 585 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 FAM153AQ9UHL3 310 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 SLC17A4Q9Y2C5 497 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 ZNF711Q9Y462 761 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 GPSM3Q9Y4H4 160 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 CACNA1BQ00975 2339 aa23.6■■□□□ 1.37
RNF38-208ENST00000488058 ASXL3Q9C0F0 2248 aa23.59■■□□□ 1.37
RNF38-208ENST00000488058 NDST3O95803 873 aa23.59■■□□□ 1.37
RNF38-208ENST00000488058 PTMAP06454 111 aaKnown RBP23.59■■□□□ 1.37
RNF38-208ENST00000488058 RBL1P28749 1068 aa23.59■■□□□ 1.37
RNF38-208ENST00000488058 TNNT3P45378 269 aaPredicted RBP23.59■■□□□ 1.37
RNF38-208ENST00000488058 OTUD4Q01804 1114 aaKnown RBP23.59■■□□□ 1.37
RNF38-208ENST00000488058 NOMO1Q15155 1222 aa23.59■■□□□ 1.37
RNF38-208ENST00000488058 SLC14A2Q15849 920 aa23.59■■□□□ 1.37
RNF38-208ENST00000488058 NLRP8Q86W28 1048 aa23.59■■□□□ 1.37
RNF38-208ENST00000488058 SFTPA2Q8IWL1 248 aa23.59■■□□□ 1.37
RNF38-208ENST00000488058 SYCE1Q8N0S2 351 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms