RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CHI3L2Q15782 390 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 TSNAXIP1Q2TAA8 658 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 RNF187Q5TA31 235 aaPredicted RBP9.41□□□□□ -0.9
SF3B1-211ENST00000487698 BRAT1Q6PJG6 821 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 CRTC1Q6UUV9 634 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 PARM1Q6UWI2 310 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 USP45Q70EL2 814 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 TSPAN33Q86UF1 283 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 SPATS2Q86XZ4 545 aaKnown RBP9.41□□□□□ -0.9
SF3B1-211ENST00000487698 TNS4Q8IZW8 715 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 CBARPQ8N350 705 aaPredicted RBP9.41□□□□□ -0.9
SF3B1-211ENST00000487698 TERB1Q8NA31 727 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 RDH11Q8TC12 318 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 FGF14Q92915 247 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 LRIG1Q96JA1 1093 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 RIPOR3Q96MK2 946 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 C7orf26Q96N11 449 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 KLHL32Q96NJ5 620 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 AARSD1Q9BTE6 412 aaKnown RBP9.41□□□□□ -0.9
SF3B1-211ENST00000487698 TSSK1BQ9BXA7 367 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 MTG2Q9H4K7 406 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 POMKQ9H5K3 350 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 POPDC3Q9HBV1 291 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 IGSF5Q9NSI5 407 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 SLC8A2Q9UPR5 921 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 VPS9D1Q9Y2B5 631 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 MED16Q9Y2X0 877 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 TRIOBPQ9H2D6 2365 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 TRBV5-4A0A0C4DH59 114 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 TK2O00142 265 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 DNAJC6O75061 913 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 ECI2O75521 394 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 LEFTY1O75610 366 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 CPA3P15088 417 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 BPIP17213 487 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 KCNA4P22459 653 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 GJA4P35212 333 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 MTHFRP42898 656 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 TTPAP49638 278 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 ADARP55265 1226 aaKnown RBP9.41□□□□□ -0.9
SF3B1-211ENST00000487698 HNRNPH2P55795 449 aaKnown RBP9.41□□□□□ -0.9
SF3B1-211ENST00000487698 AARS2Q5JTZ9 985 aaKnown RBP9.41□□□□□ -0.9
SF3B1-211ENST00000487698 ATG16L1Q676U5 607 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 LRRC66Q68CR7 880 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 NAIF1Q69YI7 327 aaPredicted RBP9.41□□□□□ -0.9
SF3B1-211ENST00000487698 LRRC8EQ6NSJ5 796 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 TMEM207Q6UWW9 146 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 CHRDL2Q6WN34 429 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 C10orf107Q8IVU9 208 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 FSTL5Q8N475 847 aaPredicted RBP9.41□□□□□ -0.9
SF3B1-211ENST00000487698 PAF1Q8N7H5 531 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 CCDC63Q8NA47 563 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 NXNL1Q96CM4 212 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 BIRC8Q96P09 236 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 OSBPL1AQ9BXW6 950 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 BRD9Q9H8M2 597 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 GPAMQ9HCL2 828 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 IL26Q9NPH9 171 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 CLDND1Q9NY35 253 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 GTSE1Q9NYZ3 720 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 IL36AQ9UHA7 158 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 MTF2Q9Y483 593 aaPredicted RBP9.41□□□□□ -0.9
SF3B1-211ENST00000487698 MTCH2Q9Y6C9 303 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 ATXN2Q99700 1313 aaKnown RBP9.41□□□□□ -0.9
SF3B1-211ENST00000487698 GPR39O43194 453 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 SRP72O76094 671 aaKnown RBP9.4□□□□□ -0.9
SF3B1-211ENST00000487698 TGDSO95455 350 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 PRAMEF1O95521 474 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 POU3F3P20264 500 aaPredicted RBP9.4□□□□□ -0.9
SF3B1-211ENST00000487698 CD9P21926 228 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 EIF2DP41214 584 aaKnown RBP9.4□□□□□ -0.9
SF3B1-211ENST00000487698 PTPN5P54829 565 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 ST8SIA6P61647 398 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 POLR2LP62875 67 aaKnown RBP9.4□□□□□ -0.9
SF3B1-211ENST00000487698 SETMARQ53H47 684 aaPredicted RBP9.4□□□□□ -0.9
SF3B1-211ENST00000487698 ZRANB3Q5FWF4 1079 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 ZYG11AQ6WRX3 759 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 TBC1D1Q86TI0 1168 aaPredicted RBP9.4□□□□□ -0.9
SF3B1-211ENST00000487698 PIM3Q86V86 326 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 SFTPA1Q8IWL2 248 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 YAF2Q8IY57 180 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 ZNF366Q8N895 744 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 ANKS4BQ8N8V4 417 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 SMRP1Q8NCR6 262 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 TTC8Q8TAM2 541 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 HCAR2Q8TDS4 363 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 HEXDCQ8WVB3 486 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 ANKRD49Q8WVL7 239 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 TSNARE1Q96NA8 513 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 TTYH1Q9H313 450 aaPredicted RBP9.4□□□□□ -0.9
SF3B1-211ENST00000487698 TMEM245Q9H330 911 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 FAM96AQ9H5X1 160 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 KLHL14Q9P2G3 628 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 DKK3Q9UBP4 350 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 B4GALT6Q9UBX8 382 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 MID2Q9UJV3 735 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 PLA2G4CQ9UP65 541 aa9.4□□□□□ -0.9
SF3B1-211ENST00000487698 RUVBL2Q9Y230 463 aaKnown RBP9.4□□□□□ -0.9
SF3B1-211ENST00000487698 SPTBN5Q9NRC6 3674 aaKnown RBP9.4□□□□□ -0.9
SF3B1-211ENST00000487698 UBA6A0AVT1 1052 aaPredicted RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms