RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 TAS1R1Q7RTX1 841 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 LDB1Q86U70 411 aaPredicted RBP26.06■■□□□ 1.76
HLA-C-208ENST00000487245 FAM126BQ8IXS8 530 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 CRIPAKQ8N1N5 446 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 PCDH20Q8N6Y1 951 aaKnown RBP26.06■■□□□ 1.76
HLA-C-208ENST00000487245 NAT14Q8WUY8 206 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 TRIB3Q96RU7 358 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 UHRF1Q96T88 793 aaPredicted RBP26.06■■□□□ 1.76
HLA-C-208ENST00000487245 ERVK-6Q9BXR3 956 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 SLC2A11Q9BYW1 496 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 ALG9Q9H6U8 611 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 VCX3AQ9NNX9 186 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 TMEM181Q9P2C4 612 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 MTRRQ9UBK8 725 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 FIS1Q9Y3D6 152 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 ARL5AQ9Y689 179 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 ZFP37Q9Y6Q3 630 aaPredicted RBP26.06■■□□□ 1.76
HLA-C-208ENST00000487245 ANKRD36A6QL64 1941 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 CHD5Q8TDI0 1954 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 TCRBV3S1A0A5B6 114 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 CCL22O00626 93 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 NRP2O60462 931 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 PPP1R3AQ16821 1122 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 UGT3A2Q3SY77 523 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 SAMD4BQ5PRF9 694 aaKnown RBP26.06■■□□□ 1.76
HLA-C-208ENST00000487245 PRSS55Q6UWB4 352 aaPredicted RBP26.06■■□□□ 1.76
HLA-C-208ENST00000487245 CLYBLQ8N0X4 340 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 PHF21BQ96EK2 531 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 ZNF512Q96ME7 567 aaPredicted RBP26.06■■□□□ 1.76
HLA-C-208ENST00000487245 AP4S1Q9Y587 144 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 BACE2Q9Y5Z0 518 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 ILVBLA1L0T0 632 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 BBIP1A8MTZ0 92 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 MRASO14807 208 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 TNFAIP8O95379 198 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 CD1DP15813 335 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 RPL5P46777 297 aaKnown RBP26.05■■□□□ 1.76
HLA-C-208ENST00000487245 KCNC1P48547 511 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 PLK1P53350 603 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 GALNT3Q14435 633 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 PAOXQ6QHF9 649 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 LRRC43Q8N309 656 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 OR7D4Q8NG98 312 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 ROPN1LQ96C74 230 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 ZFRQ96KR1 1074 aaKnown RBP26.05■■□□□ 1.76
HLA-C-208ENST00000487245 PRICKLE1Q96MT3 831 aaPredicted RBP26.05■■□□□ 1.76
HLA-C-208ENST00000487245 MRPS26Q9BYN8 205 aaKnown RBP26.05■■□□□ 1.76
HLA-C-208ENST00000487245 NLE1Q9NVX2 485 aaPredicted RBP26.05■■□□□ 1.76
HLA-C-208ENST00000487245 CROTQ9UKG9 612 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 PADI4Q9UM07 663 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 CRYL1Q9Y2S2 319 aa26.05■■□□□ 1.76
HLA-C-208ENST00000487245 A0A0D9SEW6 157 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 SRP72O76094 671 aaKnown RBP26.04■■□□□ 1.76
HLA-C-208ENST00000487245 TYSND1Q2T9J0 566 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 IL23RQ5VWK5 629 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 CHST9Q7L1S5 443 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 RHEBL1Q8TAI7 183 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 AARSD1Q9BTE6 412 aaKnown RBP26.04■■□□□ 1.76
HLA-C-208ENST00000487245 POLR3BQ9NW08 1133 aaPredicted RBP26.04■■□□□ 1.76
HLA-C-208ENST00000487245 HCSTQ9UBK5 93 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 H3BNC9 293 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 ZNF26P17031 533 aaPredicted RBP26.04■■□□□ 1.76
HLA-C-208ENST00000487245 SLC7A1P30825 629 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 TIAL1Q01085 375 aaKnown RBP eCLIP26.04■■□□□ 1.76
HLA-C-208ENST00000487245 ZNF549Q6P9A3 640 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 RPS27LQ71UM5 84 aaKnown RBP26.04■■□□□ 1.76
HLA-C-208ENST00000487245 RAB44Q7Z6P3 723 aaPredicted RBP26.04■■□□□ 1.76
HLA-C-208ENST00000487245 PTERQ96BW5 349 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 C19orf60Q96EN9 201 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 CDKN2AIPNLQ96HQ2 116 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 SPON2Q9BUD6 331 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 CCDC167Q9P0B6 97 aa26.04■■□□□ 1.76
HLA-C-208ENST00000487245 TANC1Q9C0D5 1861 aa26.03■■□□□ 1.76
HLA-C-208ENST00000487245 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.03■■□□□ 1.76
HLA-C-208ENST00000487245 ZNF840PA6NDX5 716 aa26.03■■□□□ 1.76
HLA-C-208ENST00000487245 SUPT7LO94864 414 aa26.03■■□□□ 1.76
HLA-C-208ENST00000487245 PSMA3P25788 255 aa26.03■■□□□ 1.76
HLA-C-208ENST00000487245 STC1P52823 247 aa26.03■■□□□ 1.76
HLA-C-208ENST00000487245 ZNF177Q13360 481 aaPredicted RBP26.03■■□□□ 1.76
HLA-C-208ENST00000487245 FAM156AQ8NDB6 213 aa26.03■■□□□ 1.76
HLA-C-208ENST00000487245 OR13C4Q8NGS5 318 aa26.03■■□□□ 1.76
HLA-C-208ENST00000487245 LPGAT1Q92604 370 aa26.03■■□□□ 1.76
HLA-C-208ENST00000487245 TCF12Q99081 682 aa26.03■■□□□ 1.76
HLA-C-208ENST00000487245 SYTL2Q9HCH5 934 aa26.03■■□□□ 1.76
HLA-C-208ENST00000487245 HSFX1Q9UBD0 423 aa26.03■■□□□ 1.76
HLA-C-208ENST00000487245 MTF2Q9Y483 593 aaPredicted RBP26.03■■□□□ 1.76
HLA-C-208ENST00000487245 INSIG1O15503 277 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 GJB3O75712 270 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 TRPA1O75762 1119 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 SLC4A1P02730 911 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 GPX3P22352 226 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 STX1BP61266 288 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 RBBP5Q15291 538 aaKnown RBP26.02■■□□□ 1.76
HLA-C-208ENST00000487245 TAF1AQ15573 450 aaPredicted RBP26.02■■□□□ 1.76
HLA-C-208ENST00000487245 AFTPHQ6ULP2 937 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 TMEM173Q86WV6 379 aaPredicted RBP26.02■■□□□ 1.76
HLA-C-208ENST00000487245 ATP6V1E2Q96A05 226 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 CYP2S1Q96SQ9 504 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 TFB2MQ9H5Q4 396 aaKnown RBP26.02■■□□□ 1.76
HLA-C-208ENST00000487245 GPBP1L1Q9HC44 474 aaPredicted RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms