RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 COMMD8Q9NX08 183 aa6.24□□□□□ -1.41
VPS13D-209ENST00000487188 MTMR10Q9NXD2 777 aa6.24□□□□□ -1.41
VPS13D-209ENST00000487188 FBXO9Q9UK97 447 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-209ENST00000487188 FZD1Q9UP38 647 aa6.24□□□□□ -1.41
VPS13D-209ENST00000487188 PCDHB3Q9Y5E6 796 aa6.24□□□□□ -1.41
VPS13D-209ENST00000487188 A0A1W2PQ67 120 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 MAGEB16A2A368 324 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 G3V2T6 193 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 DLGAP1O14490 977 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 NOBOXO60393 691 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 FAM20BO75063 409 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 IL18RAPO95256 599 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 SLC4A1P02730 911 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 PAMP19021 973 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 IL4RP24394 825 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 GTF2E2P29084 291 aaKnown RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 MTHFRP42898 656 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 SULT1E1P49888 294 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 NCS1P62166 190 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 IFITM3Q01628 133 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 IFITM2Q01629 132 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 SLC6A3Q01959 620 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 CTBP1Q13363 440 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 ZNF181Q2M3W8 571 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 TRIM60Q495X7 471 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 SIGIRRQ6IA17 410 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 SH3BP5LQ7L8J4 393 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 RALGPS2Q86X27 583 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 CCDC28AQ8IWP9 274 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 GOLM1Q8NBJ4 401 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 ACVR1CQ8NER5 493 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 FBXO30Q8TB52 745 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 SGCDQ92629 289 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 MUL1Q969V5 352 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 LRRC58Q96CX6 371 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 VMP1Q96GC9 406 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 MAELQ96JY0 434 aaKnown RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 TWNKQ96RR1 684 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 GPR22Q99680 433 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 NT5C1AQ9BXI3 368 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 KAT8Q9H7Z6 458 aaKnown RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 ENTPD7Q9NQZ7 604 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 UGT2A1Q9Y4X1 527 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 TLL2Q9Y6L7 1015 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 PMF1-BGLAPU3KQ54 211 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 A0A087X1B8 175 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 CLRN2A0PK11 232 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 EEF2KO00418 725 aaKnown RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 RGS13O14921 159 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 HOXC11O43248 304 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 ZW10O43264 779 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 GAS2O43903 313 aaKnown RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 LRIG2O94898 1065 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 ZBTB7AO95365 584 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 ANGPTL1O95841 491 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 ASNSP08243 561 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 HSD17B1P14061 328 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 GPD2P43304 727 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 NPY2RP49146 381 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 EFNA5P52803 228 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 NDST1P52848 882 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 ATXN1P54253 815 aaKnown RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 GABARAPL2P60520 117 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 C1QTNF8P60827 252 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 CCNA1P78396 465 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 ADARB1P78563 741 aaKnown RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 FPGSQ05932 587 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 TRIP4Q15650 581 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 RABL3Q5HYI8 236 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 SPANXN2Q5MJ10 180 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 NCBP2-AS2Q69YL0 99 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 NAPEPLDQ6IQ20 393 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 SLC22A9Q8IVM8 553 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 SPERTQ8NA61 448 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 TTC16Q8NEE8 873 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 PPHLN1Q8NEY8 458 aaKnown RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 CDHR1Q96JP9 859 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 GAD1Q99259 594 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 PORCNQ9H237 461 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 PDZD7Q9H5P4 517 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 NECTIN3Q9NQS3 549 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 NRBP2Q9NSY0 501 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 RABL2AQ9UBK7 228 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 C3orf18Q9UK00 162 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 SARDHQ9UL12 918 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 GPSM3Q9Y4H4 160 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 STYXL1Q9Y6J8 313 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 A0A1W2PQ72 361 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 KRT87PA6NCN2 255 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 DNAJB5O75953 348 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 IPO13O94829 963 aaKnown RBP6.23□□□□□ -1.41
VPS13D-209ENST00000487188 PTTG1O95997 202 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 NR3C2P08235 984 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 RBP1P09455 135 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 CXCL8P10145 99 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 LBPP18428 481 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 CXCR2P25025 360 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 NMBRP28336 390 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 MAGEA12P43365 314 aa6.23□□□□□ -1.41
VPS13D-209ENST00000487188 JAG1P78504 1218 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms