RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 MTF2Q9Y483 593 aaPredicted RBP16.9■□□□□ 0.3
FDPS-212ENST00000487002 ACTL7AQ9Y615 435 aa16.9■□□□□ 0.3
FDPS-212ENST00000487002 OAS3Q9Y6K5 1087 aaKnown RBP16.9■□□□□ 0.3
FDPS-212ENST00000487002 NDUFS3O75489 264 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 F11P03951 625 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 PYGLP06737 847 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 SNRPB2P08579 225 aaKnown RBP16.89■□□□□ 0.29
FDPS-212ENST00000487002 LINGO3P0C6S8 592 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 STX1BP61266 288 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 PSME3P61289 254 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 LRP8Q14114 963 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 KANK2Q63ZY3 851 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 REP15Q6BDI9 236 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 CXorf57Q6NSI4 855 aaKnown RBP16.89■□□□□ 0.29
FDPS-212ENST00000487002 HERC6Q8IVU3 1022 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 CATSPER1Q8NEC5 780 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 MDGA1Q8NFP4 955 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 ZNF461Q8TAF7 563 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 ASB9Q96DX5 294 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 TMA16Q96EY4 203 aaKnown RBP16.89■□□□□ 0.29
FDPS-212ENST00000487002 IGSF21Q96ID5 467 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 VN1R3Q9BXE9 311 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 KLF16Q9BXK1 252 aaPredicted RBP16.89■□□□□ 0.29
FDPS-212ENST00000487002 DLGAP2Q9P1A6 1054 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 TMCO1Q9UM00 188 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 PCDHGA7Q9Y5G6 932 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 RAI2Q9Y5P3 530 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 UBA6A0AVT1 1052 aaPredicted RBP16.89■□□□□ 0.29
FDPS-212ENST00000487002 EIF4E1BA6NMX2 242 aaKnown RBP16.89■□□□□ 0.29
FDPS-212ENST00000487002 SYCE1LA8MT33 242 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 H3BMM5 538 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 UBXN8O00124 270 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 ACOT8O14734 319 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 SRP72O76094 671 aaKnown RBP16.89■□□□□ 0.29
FDPS-212ENST00000487002 CDK14O94921 469 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 UQCRBP14927 111 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 RPL17P18621 184 aaKnown RBP16.89■□□□□ 0.29
FDPS-212ENST00000487002 TTPAP49638 278 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 SGSHP51688 502 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 PKNOX1P55347 436 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 ARHGEF6Q15052 776 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 PPP1R3AQ16821 1122 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 MMEL1Q495T6 779 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 AGKQ53H12 422 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 SFT2D3Q587I9 215 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 LPCAT4Q643R3 524 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 CLEC6AQ6EIG7 209 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 SPNS2Q8IVW8 549 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 RYBPQ8N488 228 aaPredicted RBP16.89■□□□□ 0.29
FDPS-212ENST00000487002 NKAPQ8N5F7 415 aaKnown RBP16.89■□□□□ 0.29
FDPS-212ENST00000487002 C1QTNF3Q9BXJ4 246 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 EPS15L1Q9UBC2 864 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 MED16Q9Y2X0 877 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 COMMD10Q9Y6G5 202 aa16.89■□□□□ 0.29
FDPS-212ENST00000487002 KIAA1671Q9BY89 1806 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 BBIP1A8MTZ0 92 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 H7C0S8 307 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 CBX4O00257 560 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 AZIN1O14977 448 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 SEC24AO95486 1093 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 LYNP07948 512 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 GFAPP14136 432 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 SH3BP2P78314 561 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 ARF5P84085 180 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 AARS2Q5JTZ9 985 aaKnown RBP16.88■□□□□ 0.29
FDPS-212ENST00000487002 RARS2Q5T160 578 aaKnown RBP16.88■□□□□ 0.29
FDPS-212ENST00000487002 OR52E8Q6IFG1 317 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 KIAA1841Q6NSI8 718 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 LPCAT1Q8NF37 534 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 BHLHE22Q8NFJ8 381 aaPredicted RBP16.88■□□□□ 0.29
FDPS-212ENST00000487002 USP13Q92995 863 aaPredicted RBP16.88■□□□□ 0.29
FDPS-212ENST00000487002 EXT2Q93063 718 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 EXOC2Q96KP1 924 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 CLSTN3Q9BQT9 956 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 MUC3BQ9H195 1237 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 EBF3Q9H4W6 596 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 YIPF1Q9Y548 306 aa16.88■□□□□ 0.29
FDPS-212ENST00000487002 ANKRD66B4E2M5 251 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 STX16-NPEPL1H3BU86 382 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 STX16O14662 325 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 VPS4BO75351 444 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 PIM1P11309 404 aaPredicted RBP16.87■□□□□ 0.29
FDPS-212ENST00000487002 FMO4P31512 558 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 ALDH1A3P47895 512 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 LCP2Q13094 533 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 ADGRE1Q14246 886 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 VEPH1Q14D04 833 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 PFKFB4Q16877 469 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 DEFB115Q30KQ5 88 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 SETMARQ53H47 684 aaPredicted RBP16.87■□□□□ 0.29
FDPS-212ENST00000487002 INO80DQ53TQ3 878 aaPredicted RBP16.87■□□□□ 0.29
FDPS-212ENST00000487002 RNF219Q5W0B1 726 aaPredicted RBP16.87■□□□□ 0.29
FDPS-212ENST00000487002 PAQR3Q6TCH7 311 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 FBXO39Q8N4B4 442 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 RIN3Q8TB24 985 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 MID1IP1Q9NPA3 183 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 SPAG4Q9NPE6 437 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 PACSIN3Q9UKS6 424 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 RNF112Q9ULX5 631 aa16.87■□□□□ 0.29
FDPS-212ENST00000487002 DNAJC15Q9Y5T4 150 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms