RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 A6NL46 340 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 F8W810 466 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 DYNC1LI2O43237 492 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-211ENST00000486901 KATNA1O75449 491 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 ALBP02768 609 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 ITGB6P18564 788 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 GPX3P22352 226 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 PRKAA2P54646 552 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 NFATC3Q12968 1075 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 RFTN1Q14699 578 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-211ENST00000486901 MAPRE2Q15555 327 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 LARP4Q71RC2 724 aaKnown RBP eCLIP12.36□□□□□ -0.436e-12■■□□□ 13
HSPG2-211ENST00000486901 C14orf80Q86SX3 495 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 AFAP1L2Q8N4X5 818 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 MAELQ96JY0 434 aaKnown RBP12.36□□□□□ -0.43
HSPG2-211ENST00000486901 BEGAINQ9BUH8 593 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 CHID1Q9BWS9 393 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 GLOD4Q9HC38 313 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 RGS18Q9NS28 235 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 CCM2LQ9NUG4 571 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-211ENST00000486901 VWA7Q9Y334 891 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 PHIPQ8WWQ0 1821 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 CFAP99D6REC4 459 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 FXYD1O00168 92 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 GPR39O43194 453 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 OR4Q2P0C623 313 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 CCNA2P20248 432 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 CDH3P22223 829 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 GALNT3Q14435 633 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 UGP2Q16851 508 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 CYBRD1Q53TN4 286 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 UNC93AQ86WB7 457 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 CRYBG2Q8N1P7 616 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 Q8N9G6 341 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-211ENST00000486901 OR13C4Q8NGS5 318 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 ZC3H15Q8WU90 426 aaKnown RBP12.36□□□□□ -0.43
HSPG2-211ENST00000486901 SNX19Q92543 992 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 FIG4Q92562 907 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 HPS1Q92902 700 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 EXOC2Q96KP1 924 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 SMPD3Q9NY59 655 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-211ENST00000486901 PKD2L2Q9NZM6 624 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 UBQLN1Q9UMX0 589 aaKnown RBP12.36□□□□□ -0.43
HSPG2-211ENST00000486901 ARL5AQ9Y689 179 aa12.36□□□□□ -0.43
HSPG2-211ENST00000486901 MAGEB16A2A368 324 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 BMP10O95393 424 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 OPRL1P41146 370 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 BCAP31P51572 246 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 SELPLGQ14242 412 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 SPCS2Q15005 226 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 OR4D1Q15615 310 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 UGT3A1Q6NUS8 523 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 GAD1Q99259 594 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 SLC30A3Q99726 388 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 HEPHQ9BQS7 1158 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 DNAI2Q9GZS0 605 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 MARCH7Q9H992 704 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 MEAF6Q9HAF1 191 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 COMMD10Q9Y6G5 202 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 SDK1Q7Z5N4 2213 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 ACOX3O15254 700 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 XPNPEP2O43895 674 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 CNMDO75829 334 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 CYP2C9P11712 490 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 ISCA2Q86U28 154 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 IGFN1Q86VF2 1251 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 ERO1BQ86YB8 467 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 MRGPRX2Q96LB1 330 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 SENP8Q96LD8 212 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 MYOCQ99972 504 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 C16orf70Q9BSU1 422 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 AGPAT4Q9NRZ5 378 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 IPO11Q9UI26 975 aaKnown RBP12.35□□□□□ -0.43
HSPG2-211ENST00000486901 SCAMP3O14828 347 aaKnown RBP12.35□□□□□ -0.43
HSPG2-211ENST00000486901 NPHS1O60500 1241 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 SERPINB7O75635 380 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 HSPA1AP0DMV8 641 aaKnown RBP12.35□□□□□ -0.43
HSPG2-211ENST00000486901 HSPA1BP0DMV9 641 aaKnown RBP12.35□□□□□ -0.43
HSPG2-211ENST00000486901 IDUAP35475 653 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 CD97P48960 835 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 ZNF280AP59817 542 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-211ENST00000486901 SLC10A7Q0GE19 358 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 GALNT2Q10471 571 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 IHHQ14623 411 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 C18orf21Q32NC0 220 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-211ENST00000486901 SLC36A3Q495N2 470 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 SGO1Q5FBB7 561 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 TMEM236Q5W0B7 351 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 R3HCC1LQ7Z5L2 792 aaKnown RBP12.35□□□□□ -0.43
HSPG2-211ENST00000486901 GALNT5Q7Z7M9 940 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 SCN4BQ8IWT1 228 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 HM13Q8TCT9 377 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 BORCS5Q969J3 196 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 TAMM41Q96BW9 452 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 CENPNQ96H22 339 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-211ENST00000486901 NEURL2Q9BR09 285 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 MCMBPQ9BTE3 642 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 ZNF112Q9UJU3 913 aa12.35□□□□□ -0.43
HSPG2-211ENST00000486901 GNGT2O14610 69 aa12.34□□□□□ -0.43
HSPG2-211ENST00000486901 BMP2P12643 396 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms