RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 RRN3Q9NYV6 651 aa8.5□□□□□ -1.05
APTX-228ENST00000486724 STIM2Q9P246 746 aa8.5□□□□□ -1.05
APTX-228ENST00000486724 KCND3Q9UK17 655 aa8.5□□□□□ -1.05
APTX-228ENST00000486724 PILRAQ9UKJ1 303 aa8.5□□□□□ -1.05
APTX-228ENST00000486724 TSPAN16Q9UKR8 245 aa8.5□□□□□ -1.05
APTX-228ENST00000486724 TFR2Q9UP52 801 aa8.5□□□□□ -1.05
APTX-228ENST00000486724 ZFR2Q9UPR6 939 aaKnown RBP8.5□□□□□ -1.05
APTX-228ENST00000486724 HBS1LQ9Y450 684 aaKnown RBP8.5□□□□□ -1.05
APTX-228ENST00000486724 USP3Q9Y6I4 520 aa8.5□□□□□ -1.05
APTX-228ENST00000486724 OAS3Q9Y6K5 1087 aaKnown RBP8.5□□□□□ -1.05
APTX-228ENST00000486724 UNC13CQ8NB66 2214 aa8.5□□□□□ -1.05
APTX-228ENST00000486724 NBEAL1Q6ZS30 2694 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 M0QYV0 167 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 FPGTO14772 594 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 CBX6O95503 412 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 FTLP02792 175 aaPredicted RBP8.49□□□□□ -1.05
APTX-228ENST00000486724 MYBL1P10243 752 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 CD1EP15812 388 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 MMP8P22894 467 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 LSP1P33241 339 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 PGDP52209 483 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 THOP1P52888 689 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 HADHBP55084 474 aaKnown RBP8.49□□□□□ -1.05
APTX-228ENST00000486724 SH3BGRP55822 239 aaPredicted RBP8.49□□□□□ -1.05
APTX-228ENST00000486724 ABHD18Q0P651 414 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 PTP4A2Q12974 167 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 DYNC1I2Q13409 638 aaKnown RBP8.49□□□□□ -1.05
APTX-228ENST00000486724 ELOAQ14241 798 aaKnown RBP8.49□□□□□ -1.05
APTX-228ENST00000486724 TCEAL1Q15170 157 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 ELOCQ15369 112 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 GOLGA7BQ2TAP0 167 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 DENND1BQ6P3S1 775 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 ZNF572Q7Z3I7 529 aaPredicted RBP8.49□□□□□ -1.05
APTX-228ENST00000486724 NLRP14Q86W24 1093 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 XYLT1Q86Y38 959 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 RHOT2Q8IXI1 618 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 UNC5BQ8IZJ1 945 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 MCOLN2Q8IZK6 566 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 FSTL5Q8N475 847 aaPredicted RBP8.49□□□□□ -1.05
APTX-228ENST00000486724 CARNMT1Q8N4J0 409 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 RNF10Q8N5U6 811 aaKnown RBP8.49□□□□□ -1.05
APTX-228ENST00000486724 C12orf29Q8N999 325 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 RCBTB1Q8NDN9 531 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 FRS2Q8WU20 508 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 ART4Q93070 314 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 ZNF653Q96CK0 615 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 THAP2Q9H0W7 228 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 CENPHQ9H3R5 247 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 OLA1Q9NTK5 396 aaKnown RBP8.49□□□□□ -1.05
APTX-228ENST00000486724 NOP53Q9NZM5 478 aaKnown RBP8.49□□□□□ -1.05
APTX-228ENST00000486724 HESX1Q9UBX0 185 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 TRIM10Q9UDY6 481 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 GUCA1BQ9UMX6 200 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 POLHQ9Y253 713 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 PCDHB3Q9Y5E6 796 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 SAR1BQ9Y6B6 198 aa8.49□□□□□ -1.05
APTX-228ENST00000486724 ZNF469Q96JG9 3925 aaPredicted RBP8.49□□□□□ -1.05
APTX-228ENST00000486724 TNRC6AQ8NDV7 1962 aaKnown RBP8.48□□□□□ -1.05
APTX-228ENST00000486724 ANKUB1A6NFN9 424 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 MCF2LO15068 1137 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 RAD51BO15315 384 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 LRCH4O75427 683 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 MTA2O94776 668 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 CPNE6O95741 557 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 CYP1A2P05177 515 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 CALB1P05937 261 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 C8BP07358 591 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 CELA2BP08218 269 aaPredicted RBP8.48□□□□□ -1.05
APTX-228ENST00000486724 ALPIP09923 528 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 PNLIPP16233 465 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 GLB1P16278 677 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 GPD2P43304 727 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 RAB15P59190 212 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 YWHAGP61981 247 aaKnown RBP eCLIP8.48□□□□□ -1.05
APTX-228ENST00000486724 RPS21P63220 83 aaKnown RBP8.48□□□□□ -1.05
APTX-228ENST00000486724 SRSF11Q05519 484 aaKnown RBP8.48□□□□□ -1.05
APTX-228ENST00000486724 BST2Q10589 180 aaKnown RBP8.48□□□□□ -1.05
APTX-228ENST00000486724 PDCLQ13371 301 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 ZRSR2Q15696 482 aaKnown RBP8.48□□□□□ -1.05
APTX-228ENST00000486724 IFI16Q16666 785 aaKnown RBP8.48□□□□□ -1.05
APTX-228ENST00000486724 PTPN20Q4JDL3 420 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 C14orf28Q4W4Y0 310 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 FSCBQ5H9T9 825 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 DCAF12Q5T6F0 453 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 FAXCQ5TGI0 409 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 KIAA1161Q6NSJ0 714 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 RD3Q7Z3Z2 195 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 KDELC2Q7Z4H8 507 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 CDH24Q86UP0 819 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 PIM3Q86V86 326 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 DNAAF5Q86Y56 855 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 MREGQ8N565 214 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 WDTC1Q8N5D0 677 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 EIF1ADQ8N9N8 165 aaKnown RBP8.48□□□□□ -1.05
APTX-228ENST00000486724 ANKRD52Q8NB46 1076 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 STK32AQ8WU08 396 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 CPA5Q8WXQ8 436 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 ARHGEF26Q96DR7 871 aa8.48□□□□□ -1.05
APTX-228ENST00000486724 PRICKLE1Q96MT3 831 aaPredicted RBP8.48□□□□□ -1.05
APTX-228ENST00000486724 CCT8L2Q96SF2 557 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms