RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ZDHHC24Q6UX98 284 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 TMEM92Q6UXU6 159 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 DPPA4Q7L190 304 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 TAS2R42Q7RTR8 314 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 LYSMD3Q7Z3D4 306 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 CROCCP2Q86T23 111 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 CAND1Q86VP6 1230 aaKnown RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 C1orf210Q8IVY1 113 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 CTAGE3PQ8IX95 158 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 KLHDC8BQ8IXV7 354 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 LMNTD2Q8IXW0 634 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 RAVER1Q8IY67 606 aaKnown RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 NRSN1Q8IZ57 195 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 OR2T34Q8NGX1 318 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 GSDMBQ8TAX9 411 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 SNX19Q92543 992 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 SPOCK2Q92563 424 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 ARRDC3Q96B67 414 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 SKA1Q96BD8 255 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 ULK4Q96C45 1275 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 DCUN1D1Q96GG9 259 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 ZNF419Q96HQ0 510 aaPredicted RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 C9orf72Q96LT7 481 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 TRIB3Q96RU7 358 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 C19orf43Q9BQ61 176 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 FAM167BQ9BTA0 163 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 WRAP53Q9BUR4 548 aaKnown RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 SPATA16Q9BXB7 569 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 TMEM121BQ9BXQ6 578 aaPredicted RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 NEUROG2Q9H2A3 272 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 CCDC68Q9H2F9 335 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 MRM3Q9HC36 420 aaKnown RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 PARD6AQ9NPB6 346 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 ITM2CQ9NQX7 267 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 CHRAC1Q9NRG0 131 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 ZDHHC18Q9NUE0 388 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 SYBUQ9NX95 663 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 ZFATQ9P243 1243 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 SARDHQ9UL12 918 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 RAB21Q9UL25 225 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 SOX13Q9UN79 622 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 PPIL1Q9Y3C6 166 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 ARL5AQ9Y689 179 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 NYNRINQ9P2P1 1898 aaKnown RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 COL4A2P08572 1712 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 GLYATL1P3A0A0U1RQE8 302 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 NPIPB15A6NHN6 443 aaPredicted RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 MEI4A8MW99 385 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 CFAP99D6REC4 459 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 E7ESA3 106 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 PLRG1O43660 514 aaKnown RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 RNGTTO60942 597 aaKnown RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 NDUFS3O75489 264 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 RPP40O75818 363 aaKnown RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 SEMA4FO95754 770 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 PRLP01236 227 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 NTRK1P04629 796 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 PRKCGP05129 697 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 INHBAP08476 426 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 MYZAPP0CAP1 466 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 AKT2P31751 481 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 SLC12A2P55011 1212 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 EIF3BP55884 814 aaKnown RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 CRADDP78560 199 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 CSTF1Q05048 431 aaKnown RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 OLIG2Q13516 323 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 GTF2H3Q13889 308 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 TRADDQ15628 312 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 CNGA3Q16281 694 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 KYNUQ16719 465 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 TMEM52BQ4KMG9 183 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 ANKRD20A4Q4UJ75 823 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 LRRC73Q5JTD7 316 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 SPDYCQ5MJ68 293 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 RNF187Q5TA31 235 aaPredicted RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 C19orf48Q6RUI8 117 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 CRTC1Q6UUV9 634 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 MAMSTRQ6ZN01 415 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 HDXQ7Z353 690 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 TMC3Q7Z5M5 1100 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 KCNMB4Q86W47 210 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 RASSF3Q86WH2 238 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 RELL1Q8IUW5 271 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 GSPT2Q8IYD1 628 aaKnown RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 AADATQ8N5Z0 425 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 MDGA1Q8NFP4 955 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 OR4K2Q8NGD2 314 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 OR4L1Q8NH43 312 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 HEXDCQ8WVB3 486 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 HNRNPLLQ8WVV9 542 aaKnown RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 FOXJ1Q92949 421 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 CAVIN3Q969G5 261 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 NUS1Q96E22 293 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 PWWP2AQ96N64 755 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 PLEKHG4BQ96PX9 1271 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 MCCC1Q96RQ3 725 aaPredicted RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 LYSMD1Q96S90 227 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 CYTH2Q99418 400 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 GORASP1Q9BQQ3 440 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 ZSCAN5AQ9BUG6 496 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms