RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 NKAIN2Q5VXU1 208 aa20.28■□□□□ 0.84
CHRD-215ENST00000485883 DOK6Q6PKX4 331 aa20.28■□□□□ 0.84
CHRD-215ENST00000485883 NAGSQ8N159 534 aa20.28■□□□□ 0.84
CHRD-215ENST00000485883 RNF214Q8ND24 703 aa20.28■□□□□ 0.84
CHRD-215ENST00000485883 JPH3Q8WXH2 748 aaPredicted RBP20.28■□□□□ 0.84
CHRD-215ENST00000485883 PMEPA1Q969W9 287 aa20.28■□□□□ 0.84
CHRD-215ENST00000485883 TRNAU1APQ9NX07 287 aaKnown RBP20.28■□□□□ 0.84
CHRD-215ENST00000485883 SEPT10Q9P0V9 454 aa20.28■□□□□ 0.84
CHRD-215ENST00000485883 CD84Q9UIB8 345 aa20.28■□□□□ 0.84
CHRD-215ENST00000485883 PCDHGA4Q9Y5G9 962 aa20.28■□□□□ 0.84
CHRD-215ENST00000485883 IGHV5-10-1A0A0J9YXX1 117 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 A0A1W2PQ67 120 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 PPM1DO15297 605 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 SOD1P00441 154 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 PDHA1P08559 390 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 TPM1P09493 284 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 CYP2A6P11509 494 aaPredicted RBP20.27■□□□□ 0.84
CHRD-215ENST00000485883 ADCY8P40145 1251 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 ARSDP51689 593 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 NFKB2Q00653 900 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 NR1D2Q14995 579 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 PRICKLE2Q7Z3G6 844 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 TECPR1Q7Z6L1 1165 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 ATPAF2Q8N5M1 289 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 PIH1D2Q8WWB5 315 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 HTR3CQ8WXA8 447 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 SCRN2Q96FV2 425 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 BTBD6Q96KE9 485 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 SLC17A4Q9Y2C5 497 aa20.27■□□□□ 0.84
CHRD-215ENST00000485883 A0A087X0T9 212 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 FAM87AP0C7U9 286 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 FAM228BP0C875 321 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 MPSTP25325 297 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 MMP13P45452 471 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 IHHQ14623 411 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 BOLA3Q53S33 107 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 ARMC12Q5T9G4 340 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 MARC1Q5VT66 337 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 ALKBH5Q6P6C2 394 aaKnown RBP20.26■□□□□ 0.83
CHRD-215ENST00000485883 TRIM74Q86UV6 250 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 CCDC74BQ96LY2 380 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 MCCC1Q96RQ3 725 aaPredicted RBP20.26■□□□□ 0.83
CHRD-215ENST00000485883 ARHGAP9Q9BRR9 750 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 PCDH18Q9HCL0 1135 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 TMEM98Q9Y2Y6 226 aa20.26■□□□□ 0.83
CHRD-215ENST00000485883 PSMD11O00231 422 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 ITGB2P05107 769 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 IVLP07476 585 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 FGF3P11487 239 aaPredicted RBP20.25■□□□□ 0.83
CHRD-215ENST00000485883 ITGB6P18564 788 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 HNRNPH3P31942 346 aaKnown RBP20.25■□□□□ 0.83
CHRD-215ENST00000485883 GPR1P46091 355 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 CCDC122Q5T0U0 273 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 SCAMP4Q969E2 229 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 AGAP2Q99490 1192 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 TRIM4Q9C037 500 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 THAP2Q9H0W7 228 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 ABCG8Q9H221 673 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 CLMPQ9H6B4 373 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 NT5MQ9NPB1 228 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 KCTD5Q9NXV2 234 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 TMEM9Q9P0T7 183 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 PPIL1Q9Y3C6 166 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 PCDHB11Q9Y5F2 797 aa20.25■□□□□ 0.83
CHRD-215ENST00000485883 CYSRT1A8MQ03 144 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 IL4RP24394 825 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 TEAD1P28347 426 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 CSF2RBP32927 897 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 ACTR1BP42025 376 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 ACTR1AP61163 376 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 SLC25A11Q02978 314 aaKnown RBP20.24■□□□□ 0.83
CHRD-215ENST00000485883 KCNC4Q03721 635 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 DPTQ07507 201 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 MMRN1Q13201 1228 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 BIRC2Q13490 618 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 PIGHQ14442 188 aaPredicted RBP20.24■□□□□ 0.83
CHRD-215ENST00000485883 TBR1Q16650 682 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 LRRC66Q68CR7 880 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 USP45Q70EL2 814 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 MARK2Q7KZI7 788 aaKnown RBP20.24■□□□□ 0.83
CHRD-215ENST00000485883 VSTM4Q8IW00 320 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 BBS5Q8N3I7 341 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.24■□□□□ 0.83
CHRD-215ENST00000485883 OR8K1Q8NGG5 319 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 NSMCE1Q8WV22 266 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 SCARF2Q96GP6 870 aaPredicted RBP20.24■□□□□ 0.83
CHRD-215ENST00000485883 SEMA3CQ99985 751 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 STARD5Q9NSY2 213 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 ZNHIT6Q9NWK9 470 aaKnown RBP20.24■□□□□ 0.83
CHRD-215ENST00000485883 AKAP7Q9P0M2 348 aaPredicted RBP20.24■□□□□ 0.83
CHRD-215ENST00000485883 SDK2Q58EX2 2172 aa20.24■□□□□ 0.83
CHRD-215ENST00000485883 TRBV23OR9-2A0A075B6M9 112 aa20.23■□□□□ 0.83
CHRD-215ENST00000485883 IGHV1OR21-1A0A087WYE8 117 aa20.23■□□□□ 0.83
CHRD-215ENST00000485883 HGSO14964 777 aaPredicted RBP20.23■□□□□ 0.83
CHRD-215ENST00000485883 FZD6O60353 706 aa20.23■□□□□ 0.83
CHRD-215ENST00000485883 WISP1O95388 367 aa20.23■□□□□ 0.83
CHRD-215ENST00000485883 CYP1A2P05177 515 aa20.23■□□□□ 0.83
CHRD-215ENST00000485883 CD48P09326 243 aa20.23■□□□□ 0.83
CHRD-215ENST00000485883 NFKBIAP25963 317 aa20.23■□□□□ 0.83
CHRD-215ENST00000485883 CD82P27701 267 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms