RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 KLF15Q9UIH9 416 aa12.6□□□□□ -0.39
SDHB-207ENST00000485515 SHOC2Q9UQ13 582 aa12.6□□□□□ -0.39
SDHB-207ENST00000485515 LOC285095A0A1B0GVY8 99 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 F5H423 210 aaPredicted RBP12.59□□□□□ -0.39
SDHB-207ENST00000485515 TRIM38O00635 465 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 RFPL3O75679 317 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 FGF1P05230 155 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 SHC2P98077 582 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 C1orf61Q13536 156 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 PTPRRQ15256 657 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 SLC1A5Q15758 541 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 P3H1Q32P28 736 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 ADAMTSL4Q6UY14 1074 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 LYSMD3Q7Z3D4 306 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 SLCO6A1Q86UG4 719 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 SLC13A5Q86YT5 568 aaPredicted RBP12.59□□□□□ -0.39
SDHB-207ENST00000485515 RBFAQ8N0V3 343 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 SLC25A41Q8N5S1 370 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 PNPLA1Q8N8W4 532 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 FAM181AQ8N9Y4 354 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 CCDC110Q8TBZ0 833 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 SCAMP4Q969E2 229 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 SMIM14Q96QK8 99 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 LRRC61Q9BV99 259 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 RIOK2Q9BVS4 552 aaKnown RBP12.59□□□□□ -0.39
SDHB-207ENST00000485515 CYP4F12Q9HCS2 524 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.59□□□□□ -0.39
SDHB-207ENST00000485515 ZNF148Q9UQR1 794 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 PKP3Q9Y446 797 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 ZNF711Q9Y462 761 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 CACNA1AO00555 2505 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 LRRK1Q38SD2 2015 aa12.59□□□□□ -0.39
SDHB-207ENST00000485515 A0A0U1RQS6 177 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 PRSS38A1L453 326 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 C5orf60A6NFR6 353 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 TMEM202A6NGA9 273 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 PSMD3O43242 534 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 HYAL3O43820 417 aaPredicted RBP12.58□□□□□ -0.4
SDHB-207ENST00000485515 ASMTLO95671 621 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 PIRTP0C851 137 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 CKMT1AP12532 417 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 ACP1P24666 158 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 E2F1Q01094 437 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 NR0B2Q15466 257 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 PARP6Q2NL67 630 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 DEFB133Q30KQ1 61 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 PROX2Q3B8N5 592 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 SIRPB2Q5JXA9 342 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 FAM182AQ5T1J6 154 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 KDELC1Q6UW63 502 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 GLT6D1Q7Z4J2 308 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 TMC3Q7Z5M5 1100 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 RAB44Q7Z6P3 723 aaPredicted RBP12.58□□□□□ -0.4
SDHB-207ENST00000485515 TAF8Q7Z7C8 310 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 CHCHD4Q8N4Q1 142 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 FAM71DQ8N9W8 422 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 BLOC1S5Q8TDH9 187 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 PDXPQ96GD0 296 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 OXNAD1Q96HP4 312 aaPredicted RBP12.58□□□□□ -0.4
SDHB-207ENST00000485515 MRGPRX2Q96LB1 330 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 APOLD1Q96LR9 279 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 TMEM121Q9BTD3 319 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 ZSCAN5AQ9BUG6 496 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 LGR4Q9BXB1 951 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 SPATA16Q9BXB7 569 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 ABCG4Q9H172 646 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 CARS2Q9HA77 564 aaKnown RBP12.58□□□□□ -0.4
SDHB-207ENST00000485515 HOMER3Q9NSC5 361 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 ZKSCAN5Q9Y2L8 839 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 JRKLQ9Y4A0 524 aa12.58□□□□□ -0.4
SDHB-207ENST00000485515 TDRD6O60522 2096 aaKnown RBP12.58□□□□□ -0.4
SDHB-207ENST00000485515 COL5A1P20908 1838 aaPredicted RBP12.58□□□□□ -0.4
SDHB-207ENST00000485515 SPTBN2O15020 2390 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 YY2O15391 372 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 KIF5CO60282 957 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 PPFIA2O75334 1257 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 GCATO75600 419 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 PSMB4P28070 264 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 HMGCLP35914 325 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 ACADVLP49748 655 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 DCDC1P59894 354 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 PDE1BQ01064 536 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 ILF3Q12906 894 aaKnown RBP eCLIP12.57□□□□□ -0.4
SDHB-207ENST00000485515 DNAJC3Q13217 504 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 CDKN3Q16667 212 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 ZNF569Q5MCW4 686 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 C6orf132Q5T0Z8 1188 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 PDPK2PQ6A1A2 396 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 DOK6Q6PKX4 331 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 CCDC89Q8N998 374 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 SLC35B2Q8TB61 432 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 OR1E3Q8WZA6 343 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 NAT6Q93015 286 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 FICDQ9BVA6 458 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 SCNM1Q9BWG6 230 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 GSDMCQ9BYG8 508 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 TCEAL2Q9H3H9 227 aaPredicted RBP12.57□□□□□ -0.4
SDHB-207ENST00000485515 FGF22Q9HCT0 170 aa12.57□□□□□ -0.4
SDHB-207ENST00000485515 MRPL40Q9NQ50 206 aaKnown RBP12.57□□□□□ -0.4
SDHB-207ENST00000485515 TRNAU1APQ9NX07 287 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms