RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 CYP1B1Q16678 543 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 LONRF2Q1L5Z9 754 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 ZDHHC20Q5W0Z9 365 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 DENND2CQ68D51 928 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 RAET1GQ6H3X3 334 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 KDELC2Q7Z4H8 507 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 GATAD2AQ86YP4 633 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 SDR16C5Q8N3Y7 309 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 SLC25A45Q8N413 288 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 PRELID2Q8N945 189 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 OR56A4Q8NGH8 313 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 ACTRT1Q8TDG2 376 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 SCAMP4Q969E2 229 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 LRRC45Q96CN5 670 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 COX14Q96I36 57 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 CAMK1GQ96NX5 476 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 PLEKHG4BQ96PX9 1271 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 OSBPL9Q96SU4 736 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 FICDQ9BVA6 458 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 FRMD8Q9BZ67 464 aaPredicted RBP15.83■□□□□ 0.12
UPF3A-208ENST00000484246 LRRC40Q9H9A6 602 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 FGF22Q9HCT0 170 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 SPASTQ9UBP0 616 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 KLQ9UEF7 1012 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 APOBEC3BQ9UH17 382 aaKnown RBP15.83■□□□□ 0.12
UPF3A-208ENST00000484246 ZNF148Q9UQR1 794 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.83■□□□□ 0.12
UPF3A-208ENST00000484246 F5H423 210 aaPredicted RBP15.82■□□□□ 0.12
UPF3A-208ENST00000484246 PGRMC1O00264 195 aaKnown RBP15.82■□□□□ 0.12
UPF3A-208ENST00000484246 TPP1O14773 563 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 SCAMP1O15126 338 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 PSMD3O43242 534 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 PPFIA2O75334 1257 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 AP2A1O95782 977 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 PIRTP0C851 137 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 TCP1P17987 556 aaKnown RBP15.82■□□□□ 0.12
UPF3A-208ENST00000484246 FDFT1P37268 417 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 GPR1P46091 355 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 HK3P52790 923 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 PPARDQ03181 441 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 DENND5AQ6IQ26 1287 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 C4orf22Q6V702 233 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 FSTL5Q8N475 847 aaPredicted RBP15.82■□□□□ 0.12
UPF3A-208ENST00000484246 OR4C6Q8NH72 309 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 RHBDD1Q8TEB9 315 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 SETD7Q8WTS6 366 aaKnown RBP15.82■□□□□ 0.12
UPF3A-208ENST00000484246 PDXPQ96GD0 296 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 SCARF2Q96GP6 870 aaPredicted RBP15.82■□□□□ 0.12
UPF3A-208ENST00000484246 MS4A3Q96HJ5 214 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 LRRC61Q9BV99 259 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 RIOK2Q9BVS4 552 aaKnown RBP15.82■□□□□ 0.12
UPF3A-208ENST00000484246 LGR4Q9BXB1 951 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 GPR63Q9BZJ6 419 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 FAM83DQ9H4H8 585 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 NLGN3Q9NZ94 848 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 PAK5Q9P286 719 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 SHOC2Q9UQ13 582 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 SLC17A4Q9Y2C5 497 aa15.82■□□□□ 0.12
UPF3A-208ENST00000484246 COL5A1P20908 1838 aaPredicted RBP15.82■□□□□ 0.12
UPF3A-208ENST00000484246 NEMP2A6NFY4 417 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 TMEM202A6NGA9 273 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 LMO7DNF2Z398 122 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 GIPC1O14908 333 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 AURKAO14965 403 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 TNFSF14O43557 240 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 SDC3O75056 442 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 SUN1O94901 812 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 AGTP01019 485 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 IVLP07476 585 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 SRP54P61011 504 aaKnown RBP15.81■□□□□ 0.12
UPF3A-208ENST00000484246 SEMA5AQ13591 1074 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 TRIP6Q15654 476 aaKnown RBP15.81■□□□□ 0.12
UPF3A-208ENST00000484246 PAPD7Q5XG87 772 aaKnown RBP15.81■□□□□ 0.12
UPF3A-208ENST00000484246 ENPP7Q6UWV6 458 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 RBFAQ8N0V3 343 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 ASCC3Q8N3C0 2202 aaKnown RBP15.81■□□□□ 0.12
UPF3A-208ENST00000484246 SLC25A41Q8N5S1 370 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 TRAM1L1Q8N609 369 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 FAM181AQ8N9Y4 354 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 COG1Q8WTW3 980 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 OR1E3Q8WZA6 343 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 TBL1YQ9BQ87 522 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 ZSCAN5AQ9BUG6 496 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 DUSP23Q9BVJ7 150 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 SLC13A1Q9BZW2 595 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 UCKL1Q9NWZ5 548 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 IL17CQ9P0M4 197 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 FTSJ1Q9UET6 329 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 CD84Q9UIB8 345 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 DNAH14Q0VDD8 3507 aa15.81■□□□□ 0.12
UPF3A-208ENST00000484246 ADAMTS9Q9P2N4 1935 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 PRSS38A1L453 326 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 FADS2P1A8MWK0 482 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 AQP9O43315 295 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 IFNB1P01574 187 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 ALPPL2P10696 532 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 BPIP17213 487 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 ACTN2P35609 894 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 SNX1Q13596 522 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 TAF1AQ15573 450 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms