RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 KERAO60938 352 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 MATN4O95460 622 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 BMP2P12643 396 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 IDO1P14902 403 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 IL10P22301 178 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 GRK4P32298 578 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 GRIA3P42263 894 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 GPR15P49685 360 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 STC1P52823 247 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 RAD51Q06609 339 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 CYTH1Q15438 398 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 MIB1Q86YT6 1006 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 MINDY1Q8N5J2 469 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 TRIML2Q8N7C3 387 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 PNPLA1Q8N8W4 532 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 SNX31Q8N9S9 440 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 TUBGCP3Q96CW5 907 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 CIB1Q99828 191 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 CCT7Q99832 543 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 GPATCH1Q9BRR8 931 aaKnown RBP15.33■□□□□ 0.04
C9orf3-218ENST00000482056 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.33■□□□□ 0.04
C9orf3-218ENST00000482056 IL37Q9NZH6 218 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 ABCD2Q9UBJ2 740 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 RNF112Q9ULX5 631 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 MYRFQ9Y2G1 1151 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 SQORQ9Y6N5 450 aa15.33■□□□□ 0.04
C9orf3-218ENST00000482056 SLC12A8A0AV02 714 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 C7orf72A4D263 438 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 SUPT3HB4E1H0 165 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 SUPT3HO75486 399 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 RHOBTB1O94844 696 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 H6PDO95479 791 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 NDST3O95803 873 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 EOMESO95936 686 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 HSD17B1P14061 328 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 FGFR3P22607 806 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 OR1G1P47890 313 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 KPNA1P52294 538 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-218ENST00000482056 HUNKP57058 714 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 LCP2Q13094 533 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 IHHQ14623 411 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 OR4D1Q15615 310 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 TYSND1Q2T9J0 566 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 MYLK3Q32MK0 819 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 EML3Q32P44 896 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 ISLR2Q6UXK2 745 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 ERMP1Q7Z2K6 904 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 AMIGO2Q86SJ2 522 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 CARM1Q86X55 608 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 FBXO39Q8N4B4 442 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 KIAA1191Q96A73 305 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 FAM193BQ96PV7 902 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-218ENST00000482056 RBM38Q9H0Z9 239 aaKnown RBP15.32■□□□□ 0.04
C9orf3-218ENST00000482056 MUC13Q9H3R2 512 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 ZFYVE28Q9HCC9 887 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 CCM2LQ9NUG4 571 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-218ENST00000482056 TAS2R13Q9NYV9 303 aa15.32■□□□□ 0.04
C9orf3-218ENST00000482056 UBA6A0AVT1 1052 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 SYN3O14994 580 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 CLASP2O75122 1294 aaKnown RBP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 SIX3O95343 332 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 CHEK2O96017 543 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 HMBSP08397 361 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 PSMA4P25789 261 aaKnown RBP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 RING1Q06587 406 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 GALNT3Q14435 633 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 FAM26DQ5JW98 314 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 TBCELQ5QJ74 424 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 PPP4R4Q6NUP7 873 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 SPATA19Q7Z5L4 167 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 TRPC4APQ8TEL6 797 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 TSPEARQ8WU66 669 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 RMND5BQ96G75 393 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 ATOH8Q96SQ7 321 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 DERL2Q9GZP9 239 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 VPS9D1Q9Y2B5 631 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 DHRS12A0PJE2 317 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 FAM92AA1XBS5 289 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 MOXD2PA6NHM9 499 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 PFDN6O15212 129 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 HTRA2O43464 458 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 TIPRLO75663 272 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 MYCNP04198 464 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 ASGR1P07306 291 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 HGFP14210 728 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 ZNF23P17027 643 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 EEF1DP29692 281 aaKnown RBP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 ACVRL1P37023 503 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 NME5P56597 212 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 NKX3-2P78367 333 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 TIAL1Q01085 375 aaKnown RBP eCLIP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 CLCQ05315 142 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 DSC1Q08554 894 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 VPS26BQ4G0F5 336 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 CTXN3Q4LDR2 81 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 ANKS6Q68DC2 871 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 HMBOX1Q6NT76 420 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 AFTPHQ6ULP2 937 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 RETREG3Q86VR2 466 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms