RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 RPL26P61254 145 aaKnown RBP10.57□□□□□ -0.72
SSBP1-210ENST00000481508 BNIP3Q12983 259 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 EIF2B5Q13144 721 aaKnown RBP10.57□□□□□ -0.72
SSBP1-210ENST00000481508 PDE1CQ14123 709 aaPredicted RBP10.57□□□□□ -0.72
SSBP1-210ENST00000481508 LRRC14Q15048 493 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 LONRF2Q1L5Z9 754 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 SIRPB2Q5JXA9 342 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 TTC27Q6P3X3 843 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 PDZD3Q86UT5 571 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 ZSCAN30Q86W11 494 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 GATAD2AQ86YP4 633 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 KLHDC8BQ8IXV7 354 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 UBE2Q2Q8WVN8 375 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 RTP4Q96DX8 246 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 NUS1Q96E22 293 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 DTD2Q96FN9 168 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 LYSMD1Q96S90 227 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 AGAP2Q99490 1192 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 ELF4Q99607 663 aaPredicted RBP10.57□□□□□ -0.72
SSBP1-210ENST00000481508 AP1M1Q9BXS5 423 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 ZDHHC5Q9C0B5 715 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 ABCG8Q9H221 673 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 TCEAL2Q9H3H9 227 aaPredicted RBP10.57□□□□□ -0.72
SSBP1-210ENST00000481508 SNX12Q9UMY4 172 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 RPL26L1Q9UNX3 145 aaKnown RBP10.57□□□□□ -0.72
SSBP1-210ENST00000481508 SHOC2Q9UQ13 582 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 ZNF711Q9Y462 761 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 OR1A2Q9Y585 309 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 PTPRBP23467 1997 aa10.57□□□□□ -0.72
SSBP1-210ENST00000481508 C1orf232A0A0U1RR37 186 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 PSMD11O00231 422 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 SCAMP1O15126 338 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 FOXD2O60548 495 aaPredicted RBP10.56□□□□□ -0.72
SSBP1-210ENST00000481508 OPHN1O60890 802 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 USP12O75317 370 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 CER1O95813 267 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 ATXN3P54252 364 aaPredicted RBP10.56□□□□□ -0.72
SSBP1-210ENST00000481508 GNG11P61952 73 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 MPP3Q13368 585 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 MSLNQ13421 630 aaPredicted RBP10.56□□□□□ -0.72
SSBP1-210ENST00000481508 ARHGEF7Q14155 803 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 INPP5AQ14642 412 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 SLC1A5Q15758 541 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 KCTD11Q693B1 232 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 ITPRIPL1Q6GPH6 555 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 DENND5AQ6IQ26 1287 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 IL27RAQ6UWB1 636 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 KANSL1Q7Z3B3 1105 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 RBFAQ8N0V3 343 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 TTC30BQ8N4P2 665 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 WNT2BQ93097 391 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 SCAMP4Q969E2 229 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 IFT43Q96FT9 208 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 PBKQ96KB5 322 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 APOOQ9BUR5 198 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 LGR4Q9BXB1 951 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 C1QTNF7Q9BXJ2 289 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 GDF3Q9NR23 364 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 TM7SF3Q9NS93 570 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 UCKL1Q9NWZ5 548 aa10.56□□□□□ -0.72
SSBP1-210ENST00000481508 ARHGEF17Q96PE2 2063 aaPredicted RBP10.55□□□□□ -0.72
SSBP1-210ENST00000481508 SPTY2D1-AS1A0A0U1RR47 76 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 BUD23O43709 281 aaKnown RBP10.55□□□□□ -0.72
SSBP1-210ENST00000481508 SH3BP5O60239 455 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 GCATO75600 419 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 STK10O94804 968 aaKnown RBP10.55□□□□□ -0.72
SSBP1-210ENST00000481508 IFNB1P01574 187 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 EPHA8P29322 1005 aaPredicted RBP10.55□□□□□ -0.72
SSBP1-210ENST00000481508 CA5AP35218 305 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 RPL22P35268 128 aaKnown RBP10.55□□□□□ -0.72
SSBP1-210ENST00000481508 RABIFP47224 123 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 CCT8P50990 548 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 GEMP55040 296 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 OVGP1Q12889 678 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 MTM1Q13496 603 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 PTPRCAPQ14761 206 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 CCNG2Q16589 344 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 COL28A1Q2UY09 1125 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 P3H1Q32P28 736 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 ESRP1Q6NXG1 681 aaKnown RBP10.55□□□□□ -0.72
SSBP1-210ENST00000481508 PNCKQ6P2M8 343 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 DRICH1Q6PGQ1 229 aaPredicted RBP10.55□□□□□ -0.72
SSBP1-210ENST00000481508 ARHGEF18Q6ZSZ5 1173 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 TMC3Q7Z5M5 1100 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 PIP4P1Q86T03 277 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 TRIM74Q86UV6 250 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 GPR26Q8NDV2 337 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 DEFB124Q8NES8 71 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 RIOK2Q9BVS4 552 aaKnown RBP10.55□□□□□ -0.72
SSBP1-210ENST00000481508 ADGRE3Q9BY15 652 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 FRMD8P1Q9BZ68 369 aaPredicted RBP10.55□□□□□ -0.72
SSBP1-210ENST00000481508 KCND1Q9NSA2 647 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 PIH1D1Q9NWS0 290 aaKnown RBP10.55□□□□□ -0.72
SSBP1-210ENST00000481508 ZNF148Q9UQR1 794 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 KCTD3Q9Y597 815 aa10.55□□□□□ -0.72
SSBP1-210ENST00000481508 COL5A1P20908 1838 aaPredicted RBP10.55□□□□□ -0.72
SSBP1-210ENST00000481508 SPTA1P02549 2419 aa10.54□□□□□ -0.72
SSBP1-210ENST00000481508 GOLGA6CA6NDK9 693 aa10.54□□□□□ -0.72
SSBP1-210ENST00000481508 GOLGA6BA6NDN3 693 aa10.54□□□□□ -0.72
SSBP1-210ENST00000481508 TMEM202A6NGA9 273 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms