RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 OR2M4Q96R27 311 aa17.27■□□□□ 0.36
RXRB-203ENST00000481441 SLC38A3Q99624 504 aa17.27■□□□□ 0.36
RXRB-203ENST00000481441 TUBGCP2Q9BSJ2 902 aa17.27■□□□□ 0.36
RXRB-203ENST00000481441 SELENOOQ9BVL4 669 aa17.27■□□□□ 0.36
RXRB-203ENST00000481441 CINPQ9BW66 212 aaPredicted RBP17.27■□□□□ 0.36
RXRB-203ENST00000481441 TRBV23OR9-2A0A075B6M9 112 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 UNGP13051 313 aaPredicted RBP17.26■□□□□ 0.35
RXRB-203ENST00000481441 GNLYP22749 145 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 LHCGRP22888 699 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 VIPR1P32241 457 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 HTR7P34969 479 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 ZNF143P52747 638 aaPredicted RBP17.26■□□□□ 0.35
RXRB-203ENST00000481441 TPI1P60174 286 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 MAP7Q14244 749 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 ESPL1Q14674 2120 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 FHL5Q5TD97 284 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 DENND2CQ68D51 928 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 DOK6Q6PKX4 331 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 ASB18Q6ZVZ8 466 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 GALNT11Q8NCW6 608 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 C3orf20Q8ND61 904 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 DONSONQ9NYP3 566 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 ADAM22Q9P0K1 906 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 KIAA1468Q9P260 1216 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 DACH1Q9UI36 760 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 RPS6KL1Q9Y6S9 549 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 SHANK1Q9Y566 2161 aa17.26■□□□□ 0.35
RXRB-203ENST00000481441 TCRBV5S1A1TA0A578 114 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 SIGLEC16A6NMB1 481 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 POLR1CO15160 346 aaPredicted RBP17.25■□□□□ 0.35
RXRB-203ENST00000481441 HTRA2O43464 458 aaPredicted RBP17.25■□□□□ 0.35
RXRB-203ENST00000481441 VPS4BO75351 444 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 GFPT2O94808 682 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 EML2O95834 649 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 FURINP09958 794 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 COPB1P53618 953 aaKnown RBP17.25■□□□□ 0.35
RXRB-203ENST00000481441 RFTN1Q14699 578 aaPredicted RBP17.25■□□□□ 0.35
RXRB-203ENST00000481441 PYCR3Q53H96 274 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 RAET1GQ6H3X3 334 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 TRIM72Q6ZMU5 477 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 ARHGAP36Q6ZRI8 547 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 Q6ZVL8 140 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 ARHGAP12Q8IWW6 846 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 SSC4DQ8WTU2 575 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 PSKH2Q96QS6 385 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 PCDHB18PQ96TA0 734 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 VPS4AQ9UN37 437 aa17.25■□□□□ 0.35
RXRB-203ENST00000481441 TNRC6AQ8NDV7 1962 aaKnown RBP17.24■□□□□ 0.35
RXRB-203ENST00000481441 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.24■□□□□ 0.35
RXRB-203ENST00000481441 TTC24A2A3L6 582 aaPredicted RBP17.24■□□□□ 0.35
RXRB-203ENST00000481441 GOLGA6CA6NDK9 693 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 GOLGA6BA6NDN3 693 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 PSMD11O00231 422 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 MAP3K6O95382 1288 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 SOD1P00441 154 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 PDGFAP04085 211 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 GOLGA6DP0CG33 693 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 RNF224P0DH78 156 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 NSFP46459 744 aaKnown RBP17.24■□□□□ 0.35
RXRB-203ENST00000481441 PPM1FP49593 454 aaPredicted RBP17.24■□□□□ 0.35
RXRB-203ENST00000481441 DPTQ07507 201 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 IL10RBQ08334 325 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 TPD52L1Q16890 204 aaPredicted RBP17.24■□□□□ 0.35
RXRB-203ENST00000481441 PHF13Q86YI8 300 aaPredicted RBP17.24■□□□□ 0.35
RXRB-203ENST00000481441 FAM114A1Q8IWE2 563 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 NCSTNQ92542 709 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 SP110Q9HB58 689 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 SIDT1Q9NXL6 827 aaKnown RBP17.24■□□□□ 0.35
RXRB-203ENST00000481441 GOLGA6AQ9NYA3 693 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 TLK1Q9UKI8 766 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 TMEM98Q9Y2Y6 226 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 PCDHB3Q9Y5E6 796 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 PCDHGC4Q9Y5F7 938 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 HIVEP3Q5T1R4 2406 aa17.24■□□□□ 0.35
RXRB-203ENST00000481441 ZNF106Q9H2Y7 1883 aaKnown RBP17.24■□□□□ 0.35
RXRB-203ENST00000481441 A0A1W2PQ67 120 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 SOCS5O75159 536 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 SEMA7AO75326 666 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 RFPL1O75677 317 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 DLSTP36957 453 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 RPL7AP62424 266 aaKnown RBP17.23■□□□□ 0.35
RXRB-203ENST00000481441 LRP8Q14114 963 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 PTPRRQ15256 657 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 CAVIN1Q6NZI2 390 aaKnown RBP17.23■□□□□ 0.35
RXRB-203ENST00000481441 TECPR1Q7Z6L1 1165 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 MLKLQ8NB16 471 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 FNIP1Q8TF40 1166 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 CNPY3Q9BT09 278 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 GANQ9H2C0 597 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 SARS2Q9NP81 518 aaKnown RBP17.23■□□□□ 0.35
RXRB-203ENST00000481441 GPATCH2LQ9NWQ4 482 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 POLHQ9Y253 713 aa17.23■□□□□ 0.35
RXRB-203ENST00000481441 NPIPB15A6NHN6 443 aaPredicted RBP17.22■□□□□ 0.35
RXRB-203ENST00000481441 TTLL8A6PVC2 850 aa17.22■□□□□ 0.35
RXRB-203ENST00000481441 CPP00450 1065 aa17.22■□□□□ 0.35
RXRB-203ENST00000481441 CALB1P05937 261 aa17.22■□□□□ 0.35
RXRB-203ENST00000481441 CYP2A6P11509 494 aaPredicted RBP17.22■□□□□ 0.35
RXRB-203ENST00000481441 ZNF28P17035 718 aa17.22■□□□□ 0.35
RXRB-203ENST00000481441 TNFAIP3P21580 790 aa17.22■□□□□ 0.35
RXRB-203ENST00000481441 GPR1P46091 355 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms