RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 LDB2O43679 373 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 LZTS3O60299 673 aaPredicted RBP12.21□□□□□ -0.45
TRA2B-212ENST00000480461 ELFN1P0C7U0 828 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 CYP2A6P11509 494 aaPredicted RBP12.21□□□□□ -0.45
TRA2B-212ENST00000480461 TPSB2P20231 275 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 CA5AP35218 305 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 RPL21P46778 160 aaKnown RBP12.21□□□□□ -0.45
TRA2B-212ENST00000480461 IRX4P78413 519 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 SLC7A5Q01650 507 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 CKAP4Q07065 602 aaKnown RBP12.21□□□□□ -0.45
TRA2B-212ENST00000480461 SGCGQ13326 291 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 DHX34Q14147 1143 aaKnown RBP12.21□□□□□ -0.45
TRA2B-212ENST00000480461 TPSAB1Q15661 275 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 TPRG1LQ5T0D9 272 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 PEAR1Q5VY43 1037 aaPredicted RBP12.21□□□□□ -0.45
TRA2B-212ENST00000480461 DUPD1Q68J44 220 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 SYDE1Q6ZW31 735 aaPredicted RBP12.21□□□□□ -0.45
TRA2B-212ENST00000480461 CYP2U1Q7Z449 544 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 NDUFAF2Q8N183 169 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 GPR26Q8NDV2 337 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 BRSK1Q8TDC3 778 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 BLOC1S5Q8TDH9 187 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 SNX19Q92543 992 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 PIGKQ92643 395 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 SERAC1Q96JX3 654 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 PWWP2AQ96N64 755 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 PPP1R2P1Q96PQ5 205 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 TRIM31Q9BZY9 425 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 MIR1-1HGQ9H1L0 117 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 ABCG8Q9H221 673 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 ZFYVE1Q9HBF4 777 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 BPIFA1Q9NP55 256 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 FSCN3Q9NQT6 498 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 EIF2B3Q9NR50 452 aaKnown RBP12.21□□□□□ -0.45
TRA2B-212ENST00000480461 IL17CQ9P0M4 197 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 CD84Q9UIB8 345 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 TPX2Q9ULW0 747 aaKnown RBP12.21□□□□□ -0.45
TRA2B-212ENST00000480461 SNX24Q9Y343 169 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 ARL5AQ9Y689 179 aa12.21□□□□□ -0.45
TRA2B-212ENST00000480461 THADAQ6YHU6 1953 aa12.21□□□□□ -0.46
TRA2B-212ENST00000480461 CACNA1EQ15878 2313 aa12.21□□□□□ -0.46
TRA2B-212ENST00000480461 HELZ2Q9BYK8 2649 aaKnown RBP12.2□□□□□ -0.46
TRA2B-212ENST00000480461 SPAARA0A1B0GVQ0 90 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 FAM187AA6NFU0 413 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 MEI4A8MW99 385 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 GOLGA8MH3BSY2 632 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 DNALI1O14645 258 aaPredicted RBP12.2□□□□□ -0.46
TRA2B-212ENST00000480461 SOD1P00441 154 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 ZNF30P17039 623 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 BPIP17213 487 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 IGFALSP35858 605 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 SPINT3P49223 89 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 LMAN1P49257 510 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 CSNK1EP49674 416 aaKnown RBP12.2□□□□□ -0.46
TRA2B-212ENST00000480461 CRADDP78560 199 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 SIM1P81133 766 aaPredicted RBP12.2□□□□□ -0.46
TRA2B-212ENST00000480461 INPP5AQ14642 412 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 CCDC38Q502W7 563 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 SETMARQ53H47 684 aaPredicted RBP12.2□□□□□ -0.46
TRA2B-212ENST00000480461 WDR45BQ5MNZ6 344 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 NAPEPLDQ6IQ20 393 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 GCNT7Q6ZNI0 430 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 LINC00523Q86TU6 105 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 PDZD3Q86UT5 571 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 SYT12Q8IV01 421 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 RGL4Q8IZJ4 473 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 ZCCHC9Q8N567 271 aaKnown RBP12.2□□□□□ -0.46
TRA2B-212ENST00000480461 DTD2Q96FN9 168 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 ZNF778Q96MU6 729 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 RUNDC3BQ96NL0 473 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 ERP44Q9BS26 406 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 GPR63Q9BZJ6 419 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 SLC32A1Q9H598 525 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 GRHL1Q9NZI5 618 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 ASIC3Q9UHC3 531 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 DMGDHQ9UI17 866 aaKnown RBP12.2□□□□□ -0.46
TRA2B-212ENST00000480461 TMPRSS11EQ9UL52 423 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 DMTF1Q9Y222 760 aa12.2□□□□□ -0.46
TRA2B-212ENST00000480461 GOLGA6CA6NDK9 693 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 GOLGA6BA6NDN3 693 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 MROH6A6NGR9 719 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 PRAMEF26H0Y7S4 382 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 PSMD11O00231 422 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 GAPDHSO14556 408 aaPredicted RBP12.19□□□□□ -0.46
TRA2B-212ENST00000480461 BCAT2O15382 392 aaPredicted RBP12.19□□□□□ -0.46
TRA2B-212ENST00000480461 ZIC2O95409 532 aaPredicted RBP12.19□□□□□ -0.46
TRA2B-212ENST00000480461 GOLGA6DP0CG33 693 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 HNRNPA2B1P22626 353 aaKnown RBP12.19□□□□□ -0.46
TRA2B-212ENST00000480461 PSMA3P25788 255 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 HMGCLP35914 325 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 MAGEA3P43357 314 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 SESN2P58004 480 aaPredicted RBP12.19□□□□□ -0.46
TRA2B-212ENST00000480461 RACK1P63244 317 aaKnown RBP12.19□□□□□ -0.46
TRA2B-212ENST00000480461 CDK16Q00536 496 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 CDH17Q12864 832 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 ARHGEF7Q14155 803 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 POU6F1Q14863 301 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 LRRC14Q15048 493 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 IRF4Q15306 451 aa12.19□□□□□ -0.46
TRA2B-212ENST00000480461 TAF1AQ15573 450 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms