RNA–Protein interactions for RNA: ENST00000480438.1

HUWE1-211, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-211ENST00000480438 CDH24Q86UP0 819 aa13.84□□□□□ -0.19
HUWE1-211ENST00000480438 ZNF354CQ86Y25 554 aa13.84□□□□□ -0.19
HUWE1-211ENST00000480438 CAMK1DQ8IU85 385 aa13.84□□□□□ -0.19
HUWE1-211ENST00000480438 C9orf72Q96LT7 481 aa13.84□□□□□ -0.19
HUWE1-211ENST00000480438 KREMEN1Q96MU8 473 aa13.84□□□□□ -0.19
HUWE1-211ENST00000480438 TBC1D10AQ9BXI6 508 aa13.84□□□□□ -0.19
HUWE1-211ENST00000480438 GTPBP4Q9BZE4 634 aaKnown RBP13.84□□□□□ -0.19
HUWE1-211ENST00000480438 AGPAT4Q9NRZ5 378 aa13.84□□□□□ -0.19
HUWE1-211ENST00000480438 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.84□□□□□ -0.19
HUWE1-211ENST00000480438 USP25Q9UHP3 1055 aa13.84□□□□□ -0.19
HUWE1-211ENST00000480438 CNTN6Q9UQ52 1028 aa13.84□□□□□ -0.19
HUWE1-211ENST00000480438 MTMR6Q9Y217 621 aa13.84□□□□□ -0.19
HUWE1-211ENST00000480438 FARSAQ9Y285 508 aaKnown RBP13.84□□□□□ -0.19
HUWE1-211ENST00000480438 DCHS2Q6V1P9 2916 aa13.84□□□□□ -0.19
HUWE1-211ENST00000480438 RAMP2O60895 175 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 YEATS4O95619 227 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 IVLP07476 585 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 EPHA4P54764 986 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 CDK3Q00526 305 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.83□□□□□ -0.2
HUWE1-211ENST00000480438 AFMIDQ63HM1 303 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 KCNMB4Q86W47 210 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 PPP1R3BQ86XI6 285 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 LMO3Q8TAP4 145 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 INPP5DQ92835 1189 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 NT5C3BQ969T7 300 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 SH3KBP1Q96B97 665 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 PGAP3Q96FM1 320 aaPredicted RBP13.83□□□□□ -0.2
HUWE1-211ENST00000480438 ZNF641Q96N77 438 aaPredicted RBP13.83□□□□□ -0.2
HUWE1-211ENST00000480438 ZNF396Q96N95 335 aaPredicted RBP13.83□□□□□ -0.2
HUWE1-211ENST00000480438 OR2M4Q96R27 311 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 KLC2Q9H0B6 622 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 SARS2Q9NP81 518 aaKnown RBP13.83□□□□□ -0.2
HUWE1-211ENST00000480438 CHST11Q9NPF2 352 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 LHX3Q9UBR4 397 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 STAP1Q9ULZ2 295 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 PCDHA7Q9UN72 937 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 SLC17A4Q9Y2C5 497 aa13.83□□□□□ -0.2
HUWE1-211ENST00000480438 MN1Q10571 1320 aaPredicted RBP13.83□□□□□ -0.2
HUWE1-211ENST00000480438 DOCK4Q8N1I0 1966 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 A0A1B0GUH1 482 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 HTR1EP28566 365 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 GNA15P30679 374 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 ME1P48163 572 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 MAPKAPK2P49137 400 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 GCNT1Q02742 428 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 CYTH1Q15438 398 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 KYNUQ16719 465 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 INO80DQ53TQ3 878 aaPredicted RBP13.82□□□□□ -0.2
HUWE1-211ENST00000480438 VWA2Q5GFL6 755 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 LYPLAL1Q5VWZ2 237 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 HGSNATQ68CP4 663 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 NLRP14Q86W24 1093 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 PASD1Q8IV76 773 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 NXPE1Q8N323 547 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 GLIS1Q8NBF1 620 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 ZNF397Q8NF99 534 aaPredicted RBP13.82□□□□□ -0.2
HUWE1-211ENST00000480438 ADAMTS17Q8TE56 1095 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 CASKIN2Q8WXE0 1202 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 CCDC47Q96A33 483 aaKnown RBP13.82□□□□□ -0.2
HUWE1-211ENST00000480438 NUS1Q96E22 293 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 TGM7Q96PF1 710 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 STN1Q9H668 368 aaKnown RBP13.82□□□□□ -0.2
HUWE1-211ENST00000480438 UPF2Q9HAU5 1272 aaKnown RBP13.82□□□□□ -0.2
HUWE1-211ENST00000480438 C5AR2Q9P296 337 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 ARMCX3Q9UH62 379 aaPredicted RBP13.82□□□□□ -0.2
HUWE1-211ENST00000480438 TMEM98Q9Y2Y6 226 aa13.82□□□□□ -0.2
HUWE1-211ENST00000480438 MDC1Q14676 2089 aaKnown RBP13.81□□□□□ -0.2
HUWE1-211ENST00000480438 GOLGA6CA6NDK9 693 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 GOLGA6BA6NDN3 693 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 PPP1R3GB7ZBB8 358 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 SLC16A3O15427 465 aaKnown RBP13.81□□□□□ -0.2
HUWE1-211ENST00000480438 C9P02748 559 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 MYL1P05976 194 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 GOLGA6DP0CG33 693 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 DRD2P14416 443 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 CD1EP15812 388 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 RHOQP17081 205 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 CAPN3P20807 821 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 GRM3Q14832 879 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 SMTNL2Q2TAL5 461 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 SLC25A52Q3SY17 297 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 ANO6Q4KMQ2 910 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 VWA5B1Q5TIE3 1220 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 PWWP2BQ6NUJ5 590 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 IYDQ6PHW0 289 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 MARK2Q7KZI7 788 aaKnown RBP13.81□□□□□ -0.2
HUWE1-211ENST00000480438 DPPA4Q7L190 304 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 FAM131BQ86XD5 332 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 DNAAF5Q86Y56 855 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 ARFGAP1Q8N6T3 406 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 ITLN2Q8WWU7 325 aaPredicted RBP13.81□□□□□ -0.2
HUWE1-211ENST00000480438 COQ10AQ96MF6 247 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 SYNCQ9H7C4 482 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 TMEM248Q9NWD8 314 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 GOLGA6AQ9NYA3 693 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 TMEM63CQ9P1W3 806 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 OR12D3Q9UGF7 316 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 PCDHGA10Q9Y5H3 936 aa13.81□□□□□ -0.2
HUWE1-211ENST00000480438 E2F3O00716 465 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms