RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 ARMC12Q5T9G4 340 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 CDCP2Q5VXM1 449 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 PDPK2PQ6A1A2 396 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TBC1D3GQ6DHY5 549 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TBC1D3CQ6IPX1 549 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 USP45Q70EL2 814 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 PID1Q7Z2X4 250 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 MAATS1Q7Z4T9 603 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 PCGF5Q86SE9 256 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TBC1D3Q8IZP1 549 aaPredicted RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 C17orf53Q8N3J3 647 aaPredicted RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 MMGT1Q8N4V1 131 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 CEP112Q8N8E3 955 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 DCBLD1Q8N8Z6 715 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 EIF1ADQ8N9N8 165 aaKnown RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 FAM71DQ8N9W8 422 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 C1orf54Q8WWF1 131 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 SCG3Q8WXD2 468 aaKnown RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 ARRDC3Q96B67 414 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 OXNAD1Q96HP4 312 aaPredicted RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 SGSM3Q96HU1 749 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 MS4A14Q96JA4 679 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 CNDP2Q96KP4 475 aaKnown RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 MRGPRX2Q96LB1 330 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 NSMCE3Q96MG7 304 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 LENG8Q96PV6 779 aaPredicted RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 RANBP9Q96S59 729 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TNKS2Q9H2K2 1166 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 ZDHHC6Q9H6R6 413 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 RAD18Q9NS91 495 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.92□□□□□ -0.98
DDX56-211ENST00000479602 RSPH14Q9UHP6 348 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 SHOC2Q9UQ13 582 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 ACTL7AQ9Y615 435 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 PLXNA2O75051 1894 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 TMEM131Q92545 1883 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 COL6A6A6NMZ7 2263 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 LY6G6EA0A0G2JKS1 128 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 GOLGA8CPA6NN73 597 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 PRAMEF26H0Y7S4 382 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 KPNA3O00505 521 aaPredicted RBP8.91□□□□□ -0.98
DDX56-211ENST00000479602 TRIM38O00635 465 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 RFPL3O75679 317 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 HOXC4P09017 264 aaPredicted RBP8.91□□□□□ -0.98
DDX56-211ENST00000479602 CYP2A6P11509 494 aaPredicted RBP8.91□□□□□ -0.98
DDX56-211ENST00000479602 IVDP26440 423 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 HMGCLP35914 325 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 PTGIRP43119 386 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 ARRB1P49407 418 aaPredicted RBP8.91□□□□□ -0.98
DDX56-211ENST00000479602 WNT3AP56704 352 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 RPS21P63220 83 aaKnown RBP8.91□□□□□ -0.98
DDX56-211ENST00000479602 PDE1BQ01064 536 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 DPTQ07507 201 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 LAMB3Q13751 1172 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 KCNJ11Q14654 390 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 SLC1A5Q15758 541 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 CDKN3Q16667 212 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 ZNF284Q2VY69 593 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 INAVAQ3KP66 663 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 ARSIQ5FYB1 569 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 ERAP2Q6P179 960 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 ADAT2Q7Z6V5 191 aaKnown RBP8.91□□□□□ -0.98
DDX56-211ENST00000479602 ZSWIM9Q86XI8 627 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 CAMK1DQ8IU85 385 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 NRSN1Q8IZ57 195 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 OXR1Q8N573 874 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 EID2Q8N6I1 236 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 SNIP1Q8TAD8 396 aaKnown RBP8.91□□□□□ -0.98
DDX56-211ENST00000479602 GANCQ8TET4 914 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 CRELD1Q96HD1 420 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 EXOC2Q96KP1 924 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 KLHL32Q96NJ5 620 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 AGAP3Q96P47 875 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 MLPHQ9BV36 600 aaPredicted RBP8.91□□□□□ -0.98
DDX56-211ENST00000479602 C1QTNF2Q9BXJ5 285 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 XAB2Q9HCS7 855 aaKnown RBP8.91□□□□□ -0.98
DDX56-211ENST00000479602 AASDHPPTQ9NRN7 309 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 U3KQA8 63 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 MAST4O15021 2626 aa8.91□□□□□ -0.98
DDX56-211ENST00000479602 TRPM6Q9BX84 2022 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 H7C0S8 307 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 TK2O00142 265 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 SIGLEC6O43699 453 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 MAGEC1O60732 1142 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 HEXIM1O94992 359 aaKnown RBP8.9□□□□□ -0.98
DDX56-211ENST00000479602 METTL18O95568 372 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 JUPP14923 745 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 TIMP2P16035 220 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 DGKAP23743 735 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 ITPKBP27987 946 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 PSMB4P28070 264 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 VIPR1P32241 457 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 RPL22P35268 128 aaKnown RBP8.9□□□□□ -0.98
DDX56-211ENST00000479602 CD86P42081 329 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 ABL2P42684 1182 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 MAXP61244 160 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 INSM1Q01101 510 aaPredicted RBP8.9□□□□□ -0.98
DDX56-211ENST00000479602 ACVR1Q04771 509 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 CDH17Q12864 832 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 RALGDSQ12967 914 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms