RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 GGT5P36269 586 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 ARPP19P56211 112 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 DAG1Q14118 895 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 TBRG1Q3YBR2 411 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 BOLA3Q53S33 107 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 TSTD2Q5T7W7 516 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 STK32CQ86UX6 486 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 TBC1D21Q8IYX1 336 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 FBXL6Q8N531 539 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 RDH11Q8TC12 318 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 RORBQ92753 470 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 ROPN1LQ96C74 230 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 CCDC120Q96HB5 630 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 NPAP1Q9NZP6 1156 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 OSGIN1Q9UJX0 560 aa21.21■□□□□ 0.99
SDF4-206ENST00000478938 MAGED2Q9UNF1 606 aaPredicted RBP21.21■□□□□ 0.99
SDF4-206ENST00000478938 GREB1LQ9C091 1923 aaPredicted RBP21.21■□□□□ 0.99
SDF4-206ENST00000478938 PABPN1LA6NDY0 278 aaKnown RBP21.2■□□□□ 0.98
SDF4-206ENST00000478938 DHX15O43143 795 aaKnown RBP21.2■□□□□ 0.98
SDF4-206ENST00000478938 GRAP2O75791 330 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 LRIG2O94898 1065 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 APOA4P06727 396 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 MSL3P1P0C860 447 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 PRKACAP17612 351 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 NUDT1P36639 197 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 YWHAEP62258 255 aaKnown RBP21.2■□□□□ 0.98
SDF4-206ENST00000478938 VPS26BQ4G0F5 336 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 FAM102AQ5T9C2 384 aaPredicted RBP21.2■□□□□ 0.98
SDF4-206ENST00000478938 STYXQ8WUJ0 223 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 UBXN10Q96LJ8 280 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 BCL7BQ9BQE9 202 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 NTN4Q9HB63 628 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 HOXC10Q9NYD6 342 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 MORF4L1Q9UBU8 362 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 PRR12Q9ULL5 1215 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 SNX6Q9UNH7 406 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 WBP11Q9Y2W2 641 aaKnown RBP21.2■□□□□ 0.98
SDF4-206ENST00000478938 MN1Q10571 1320 aaPredicted RBP21.2■□□□□ 0.98
SDF4-206ENST00000478938 KRT87PA6NCN2 255 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 CCDC154A6NI56 674 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 FXYD1O00168 92 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 TSPAN1O60635 241 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 DBTP11182 482 aaKnown RBP21.2■□□□□ 0.98
SDF4-206ENST00000478938 BDNFP23560 247 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 PSMB9P28065 219 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 DDOSTP39656 456 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 DALRD3Q5D0E6 543 aaKnown RBP21.2■□□□□ 0.98
SDF4-206ENST00000478938 NETO2Q8NC67 525 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 SNAPC3Q92966 411 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 RNF145Q96MT1 663 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 ADPGKQ9BRR6 497 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 ACOXLQ9NUZ1 547 aa21.2■□□□□ 0.98
SDF4-206ENST00000478938 GAS2O43903 313 aaKnown RBP21.19■□□□□ 0.98
SDF4-206ENST00000478938 DNAJB5O75953 348 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 ARHGEF15O94989 841 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 SEMA3DO95025 777 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 ATG7O95352 703 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 UBE2Q1Q7Z7E8 422 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 LGALS12Q96DT0 336 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 C8orf48Q96LL4 319 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 ASB2Q96Q27 587 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 FAM118AQ9NWS6 357 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 SEPT9Q9UHD8 586 aaPredicted RBP21.19■□□□□ 0.98
SDF4-206ENST00000478938 SRCAPQ6ZRS2 3230 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 TRIM77I1YAP6 450 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 CTDSP2O14595 271 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 MLNP12872 115 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 TAGLNQ01995 201 aaKnown RBP21.19■□□□□ 0.98
SDF4-206ENST00000478938 ZNF460Q14592 562 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 ANKRD34AQ69YU3 496 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 PARP16Q8N5Y8 322 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 GTF2H4Q92759 462 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 TMBIM1Q969X1 311 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 ZHX1-C8orf76Q96EF9 292 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 VPS39Q96JC1 886 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 RHOBTB2Q9BYZ6 727 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 AMBRA1Q9C0C7 1298 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 SMURF2Q9HAU4 748 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 TLK1Q9UKI8 766 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 USP22Q9UPT9 525 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 NAALAD2Q9Y3Q0 740 aa21.19■□□□□ 0.98
SDF4-206ENST00000478938 FADS2P1A8MWK0 482 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 SHOXO15266 292 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 CPNE3O75131 537 aaKnown RBP21.18■□□□□ 0.98
SDF4-206ENST00000478938 CYP2A7P20853 494 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 SLC6A2P23975 617 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 TM4SF1P30408 202 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 SLC9A3P48764 834 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 MYL6P60660 151 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 ENPEPQ07075 957 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 TYSND1Q2T9J0 566 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 PRSS48Q7RTY5 328 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 TSNARE1Q96NA8 513 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 MBOAT4Q96T53 435 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 BDH2Q9BUT1 245 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 NYAP2Q9P242 653 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 ERVK-18Q9QC07 812 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 CNTNAP4Q9C0A0 1308 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 NEMP2A6NFY4 417 aa21.18■□□□□ 0.98
SDF4-206ENST00000478938 POLRMTO00411 1230 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms