RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 HEATR4Q86WZ0 1026 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 ZNF567Q8N184 647 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 RASGEF1CQ8N431 466 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 COG1Q8WTW3 980 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 TFB1MQ8WVM0 346 aaKnown RBP17.62■□□□□ 0.41
PTPN7-209ENST00000477554 GLOD4Q9HC38 313 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 GOLGA6AQ9NYA3 693 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 KLQ9UEF7 1012 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 AMACRQ9UHK6 382 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 CDC23Q9UJX2 597 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 TTC7AQ9ULT0 858 aaPredicted RBP17.62■□□□□ 0.41
PTPN7-209ENST00000477554 AURKAO14965 403 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 PMPCBO75439 489 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 CAPNS1P04632 268 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 RBL1P28749 1068 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 PAFAH1B1P43034 410 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 OTUD4Q01804 1114 aaKnown RBP17.61■□□□□ 0.41
PTPN7-209ENST00000477554 OLIG2Q13516 323 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 CCDC181Q5TID7 509 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 GUSBP11Q6P575 273 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 LYSMD3Q7Z3D4 306 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 SLC35F3Q8IY50 421 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 ACTL9Q8TC94 416 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 ACTRT1Q8TDG2 376 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 P3H4Q92791 437 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 OXNAD1Q96HP4 312 aaPredicted RBP17.61■□□□□ 0.41
PTPN7-209ENST00000477554 TEKT5Q96M29 485 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 WDR92Q96MX6 357 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 QKIQ96PU8 341 aaKnown RBP eCLIP17.61■□□□□ 0.41
PTPN7-209ENST00000477554 OSBPL8Q9BZF1 889 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 TMEM168Q9H0V1 697 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 SLC25A51Q9H1U9 297 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 SIRPGQ9P1W8 387 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 PLEKHM1Q9Y4G2 1056 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 SPO11Q9Y5K1 396 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 SCN8AQ9UQD0 1980 aa17.61■□□□□ 0.41
PTPN7-209ENST00000477554 RP1P56715 2156 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 A0A1W2PQ67 120 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 PGRMC1O00264 195 aaKnown RBP17.6■□□□□ 0.41
PTPN7-209ENST00000477554 TJP3O95049 919 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 CEACAM5P06731 702 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 CKMT1AP12532 417 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 ACP1P24666 158 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 CHRNA4P43681 627 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 NR2C2P49116 596 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 KIAA1024LP59773 190 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 CDK3Q00526 305 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 INSM1Q01101 510 aaPredicted RBP17.6■□□□□ 0.41
PTPN7-209ENST00000477554 CAMK2BQ13554 666 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 ARHGEF7Q14155 803 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 PERM1Q5SV97 790 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 RAET1GQ6H3X3 334 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 KDELC1Q6UW63 502 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 MICALCLQ6ZW33 695 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 MAIP1Q8WWC4 291 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 SLC13A1Q9BZW2 595 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 WDR26Q9H7D7 661 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 SPASTQ9UBP0 616 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 SHOC2Q9UQ13 582 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 R3HDM2Q9Y2K5 976 aaKnown RBP17.6■□□□□ 0.41
PTPN7-209ENST00000477554 TMEM98Q9Y2Y6 226 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 CFAP47Q6ZTR5 3102 aa17.6■□□□□ 0.41
PTPN7-209ENST00000477554 C1orf232A0A0U1RR37 186 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 ANKRD66B4E2M5 251 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 H3BM21 787 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 TAF4O00268 1085 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 ZNF185O15231 689 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 FGGP02679 453 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 SLC4A1P02730 911 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 DAB2P98082 770 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 ST3GAL2Q16842 350 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 KCTD19Q17RG1 926 aaPredicted RBP17.59■□□□□ 0.41
PTPN7-209ENST00000477554 WHAMMP3Q1A5X7 153 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 HES3Q5TGS1 186 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 DOK6Q6PKX4 331 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 SLC13A5Q86YT5 568 aaPredicted RBP17.59■□□□□ 0.41
PTPN7-209ENST00000477554 CREG2Q8IUH2 290 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 KYQ8NBH2 561 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 OR56A4Q8NGH8 313 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 MDM1Q8TC05 714 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 CAPZA3Q96KX2 299 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 RIOK2Q9BVS4 552 aaKnown RBP17.59■□□□□ 0.41
PTPN7-209ENST00000477554 BOCQ9BWV1 1114 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 TEX101Q9BY14 249 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 CYP4F12Q9HCS2 524 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 ARFGAP3Q9NP61 516 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 RABGEF1Q9UJ41 708 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 MOSPD1Q9UJG1 213 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 MRFAP1Q9Y605 127 aa17.59■□□□□ 0.41
PTPN7-209ENST00000477554 OAS3Q9Y6K5 1087 aaKnown RBP17.59■□□□□ 0.41
PTPN7-209ENST00000477554 FADS2P1A8MWK0 482 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 LMO7DNF2Z398 122 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 PSMD11O00231 422 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 INPP4BO15327 924 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 RASGRP1O95267 797 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 CES1P23141 567 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 LONRF2Q1L5Z9 754 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 ZNF648Q5T619 568 aaPredicted RBP17.58■□□□□ 0.41
PTPN7-209ENST00000477554 NRROSQ86YC3 692 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 FAM181AQ8N9Y4 354 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms