RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 NUBP1P53384 320 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 DCDC1P59894 354 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 ACVR1Q04771 509 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 SGCGQ13326 291 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 FGL2Q14314 439 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 CRYMQ14894 314 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 AGERQ15109 404 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 SPANXN3Q5MJ09 141 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 ZDHHC20Q5W0Z9 365 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 ALS2CLQ60I27 953 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 UNC5AQ6ZN44 842 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 RELL1Q8IUW5 271 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 PALM2Q8IXS6 379 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 GPR26Q8NDV2 337 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 GAB3Q8WWW8 586 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 NELL1Q92832 810 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 FCRL3Q96P31 734 aaPredicted RBP16.14■□□□□ 0.17
VHL-203ENST00000477538 PLEKHG4BQ96PX9 1271 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 C1QTNF7Q9BXJ2 289 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 CDH19Q9H159 772 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 CDC42EP4Q9H3Q1 356 aaKnown RBP16.14■□□□□ 0.17
VHL-203ENST00000477538 KCTD5Q9NXV2 234 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 NFKBIL1Q9UBC1 381 aaPredicted RBP16.14■□□□□ 0.17
VHL-203ENST00000477538 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.14■□□□□ 0.17
VHL-203ENST00000477538 ZCWPW2A0A1B0GU75 182 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 H7C0S8 307 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 SLC31A1O15431 190 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 LATO43561 262 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 PAK4O96013 591 aaPredicted RBP16.13■□□□□ 0.17
VHL-203ENST00000477538 IGHV4-34P06331 123 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 PRAMEP78395 509 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 SETMARQ53H47 684 aaPredicted RBP16.13■□□□□ 0.17
VHL-203ENST00000477538 STEAP4Q687X5 459 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 KIAA0930Q6ICG6 404 aaPredicted RBP16.13■□□□□ 0.17
VHL-203ENST00000477538 FAM151BQ6UXP7 276 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 CAPN12Q6ZSI9 719 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 ZNF765Q7L2R6 523 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 DEFB119Q8N690 84 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.13■□□□□ 0.17
VHL-203ENST00000477538 CADM4Q8NFZ8 388 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 AENQ8WTP8 325 aaKnown RBP16.13■□□□□ 0.17
VHL-203ENST00000477538 ASB12Q8WXK4 309 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 SCAMP4Q969E2 229 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 HDAC10Q969S8 669 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 AP2M1Q96CW1 435 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 CDKN2AIPNLQ96HQ2 116 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 TBATAQ96M53 351 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 ABCG8Q9H221 673 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 FAM83DQ9H4H8 585 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 ZSCAN32Q9NX65 697 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.13■□□□□ 0.17
VHL-203ENST00000477538 TMEM131Q92545 1883 aa16.13■□□□□ 0.17
VHL-203ENST00000477538 GLYATL1P3A0A0U1RQE8 302 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 METTL12A8MUP2 240 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 SSTR1P30872 391 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 PTPN5P54829 565 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 SRSF5Q13243 272 aaKnown RBP16.12■□□□□ 0.17
VHL-203ENST00000477538 LRRC14Q15048 493 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 LONRF1Q17RB8 773 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 MAP9Q49MG5 647 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 HENMT1Q5T8I9 393 aaKnown RBP16.12■□□□□ 0.17
VHL-203ENST00000477538 EMBQ6PCB8 327 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 C11orf74Q86VG3 221 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 TP53I13Q8NBR0 393 aaPredicted RBP16.12■□□□□ 0.17
VHL-203ENST00000477538 OR6P1Q8NGX9 317 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 GSDMBQ8TAX9 411 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 SNX19Q92543 992 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 BIRC7Q96CA5 298 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 TTC25Q96NG3 672 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 LRFN3Q9BTN0 628 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 RIOK2Q9BVS4 552 aaKnown RBP16.12■□□□□ 0.17
VHL-203ENST00000477538 TXLNGYQ9BZA5 131 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 SUDS3Q9H7L9 328 aaPredicted RBP16.12■□□□□ 0.17
VHL-203ENST00000477538 PLAC1Q9HBJ0 212 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 LRRC4CQ9HCJ2 640 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 IL26Q9NPH9 171 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 NINJ2Q9NZG7 142 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 APPL1Q9UKG1 709 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 FAM169AQ9Y6X4 670 aa16.12■□□□□ 0.17
VHL-203ENST00000477538 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 CCDC162PA2VCL2 907 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 OR51F1A6NGY5 319 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 MEI4A8MW99 385 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 GAPDHSO14556 408 aaPredicted RBP16.11■□□□□ 0.17
VHL-203ENST00000477538 VAPBO95292 243 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 PRAMEF1O95521 474 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 GOT2P00505 430 aaKnown RBP16.11■□□□□ 0.17
VHL-203ENST00000477538 GSTA2P09210 222 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 HNRNPA2B1P22626 353 aaKnown RBP16.11■□□□□ 0.17
VHL-203ENST00000477538 ARNTP27540 789 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 MC4RP32245 332 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 CNR2P34972 360 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 NUDT1P36639 197 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 PMS2P54278 862 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 GPX6P59796 221 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 XIAPP98170 497 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 DPTQ07507 201 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 PEX6Q13608 980 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 IRF4Q15306 451 aa16.11■□□□□ 0.17
VHL-203ENST00000477538 SMAD1Q15797 465 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms