RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 SLC17A4Q9Y2C5 497 aa9.74□□□□□ -0.85
COL4A5-204ENST00000477429 CFAP69A5D8W1 941 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 F8VZ95 297 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 STK17BO94768 372 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 CSTF2P33240 577 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL4A5-204ENST00000477429 STAT5AP42229 794 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 GPR3P46089 330 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 YBEYP58557 167 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-204ENST00000477429 CDK3Q00526 305 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 KLRB1Q12918 225 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 TRA2AQ13595 282 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL4A5-204ENST00000477429 IHHQ14623 411 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 PARP15Q460N3 678 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 PRR30Q53SZ7 412 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-204ENST00000477429 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-204ENST00000477429 DCAF12Q5T6F0 453 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 DENND2CQ68D51 928 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 TMEM71Q6P5X7 295 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 Q6ZVL8 140 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 SLFN11Q7Z7L1 901 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 NLGN4XQ8N0W4 816 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 MMP21Q8N119 569 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 PGBD5Q8N414 524 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 ARFGAP1Q8N6T3 406 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 NLGN4YQ8NFZ3 816 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-204ENST00000477429 KIAA1524Q8TCG1 905 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 NUS1Q96E22 293 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 FAM81BQ96LP2 452 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 CATSPER2Q96P56 530 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 RUFY1Q96T51 708 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 GSDMCQ9BYG8 508 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 TRIM55Q9BYV6 548 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 AKAP7Q9P0M2 348 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-204ENST00000477429 CD84Q9UIB8 345 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 PRKAB1Q9Y478 270 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 TMEM184BQ9Y519 407 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-204ENST00000477429 FBN1P35555 2871 aaKnown RBP9.73□□□□□ -0.85
COL4A5-204ENST00000477429 SHANK1Q9Y566 2161 aa9.73□□□□□ -0.85
COL4A5-204ENST00000477429 TNRC6AQ8NDV7 1962 aaKnown RBP9.72□□□□□ -0.85
COL4A5-204ENST00000477429 GFPT2O94808 682 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 HEXIM1O94992 359 aaKnown RBP9.72□□□□□ -0.85
COL4A5-204ENST00000477429 MAP3K6O95382 1288 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 CLDN1O95832 211 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 UCHL3P15374 230 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 ACTR1BP42025 376 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 MTIF2P46199 727 aaKnown RBP9.72□□□□□ -0.85
COL4A5-204ENST00000477429 BPIFB4P59827 614 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 ACTR1AP61163 376 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 RPL7AP62424 266 aaKnown RBP9.72□□□□□ -0.85
COL4A5-204ENST00000477429 ILF3Q12906 894 aaKnown RBP eCLIP9.72□□□□□ -0.85
COL4A5-204ENST00000477429 CLPPQ16740 277 aaPredicted RBP9.72□□□□□ -0.85
COL4A5-204ENST00000477429 SCYL2Q6P3W7 929 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 MARK2Q7KZI7 788 aaKnown RBP9.72□□□□□ -0.85
COL4A5-204ENST00000477429 SCARF2Q96GP6 870 aaPredicted RBP9.72□□□□□ -0.85
COL4A5-204ENST00000477429 TUBGCP5Q96RT8 1024 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 ASPSCR1Q9BZE9 553 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 GANQ9H2C0 597 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 NDST4Q9H3R1 872 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 RETREG1Q9H6L5 497 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 AKIRIN1Q9H9L7 192 aaPredicted RBP9.72□□□□□ -0.85
COL4A5-204ENST00000477429 TRNAU1APQ9NX07 287 aaKnown RBP9.72□□□□□ -0.85
COL4A5-204ENST00000477429 SIDT1Q9NXL6 827 aaKnown RBP9.72□□□□□ -0.85
COL4A5-204ENST00000477429 OGFRQ9NZT2 677 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 KLHL3Q9UH77 587 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 TLK1Q9UKI8 766 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 PCDHGC4Q9Y5F7 938 aa9.72□□□□□ -0.85
COL4A5-204ENST00000477429 GOLGA6L4A6NEF3 574 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 NPIPB15A6NHN6 443 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-204ENST00000477429 AGFG2O95081 481 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 PEX11BO96011 259 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 IVLP07476 585 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 KRT3P12035 628 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 UNGP13051 313 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-204ENST00000477429 HOXB4P17483 251 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-204ENST00000477429 GPD1P21695 349 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 KELP23276 732 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 MAP4P27816 1152 aaKnown RBP9.71□□□□□ -0.86
COL4A5-204ENST00000477429 SERPINA4P29622 427 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 DCTP40126 519 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 CSNK1DP48730 415 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 SCNN1BP51168 640 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 GFERP55789 205 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 SH3BP2P78314 561 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 CDR2Q01850 454 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 BCL2L1Q07817 233 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 SLC10A7Q0GE19 358 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 ABHD18Q0P651 414 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 TRAF2Q12933 501 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 NFATC2Q13469 925 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 ERV3-1Q14264 604 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 CAMK4Q16566 473 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 MAN2A1Q16706 1144 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 NADK2Q4G0N4 442 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 VWA3BQ502W6 1294 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 PYCR3Q53H96 274 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 ASB18Q6ZVZ8 466 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 CYP4V2Q6ZWL3 525 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-204ENST00000477429 TECPR1Q7Z6L1 1165 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 SFRP1Q8N474 314 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 SCAMP4Q969E2 229 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms