RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 CLOCKO15516 846 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ZW10O43264 779 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 NDUFA2O43678 99 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 CCNT1O60563 726 aaKnown RBP4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 CCDC22O60826 627 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 PPP6R2O75170 966 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 VPS4BO75351 444 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 SULT1C4O75897 302 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 DDHD2O94830 711 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 TNFAIP8O95379 198 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 HLA-DRAP01903 254 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 GYPCP04921 128 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ALPLP05186 524 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 UQCRBP14927 111 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 CPA1P15085 419 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ZNF3P17036 446 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ENGP17813 658 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 GM2AP17900 193 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ITGAXP20702 1163 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 RPS6KB1P23443 525 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 RRM1P23921 792 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 STX2P32856 288 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 EVI2BP34910 448 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 SLC26A3P40879 764 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 SYKP43405 635 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 NR2C2P49116 596 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 CARSP49589 748 aaKnown RBP4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 RAP1GDS1P52306 607 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 AP2S1P53680 142 aaPredicted RBP4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 C21orf59P57076 290 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ERVK-21P61565 698 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 IGBP1P78318 339 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 KRT17Q04695 432 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 LRRC63Q05C16 580 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 KLHL30Q0D2K2 578 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 SCRN3Q0VDG4 424 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 COASYQ13057 564 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 STX3Q13277 289 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 SEMA3AQ14563 771 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 RAB39AQ14964 217 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 C16orf72Q14CZ0 275 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ACAP2Q15057 778 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 STK11Q15831 433 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 MEA1Q16626 185 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 C5orf22Q49AR2 442 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ANKRD20A4Q4UJ75 823 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ZC2HC1CQ53FD0 456 aaPredicted RBP4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 CLVS2Q5SYC1 327 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 BEND3Q5T5X7 828 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 AGAP7PQ5VUJ5 663 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 SHEQ5VZ18 495 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 BLOC1S2Q6QNY1 142 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 SHC4Q6S5L8 630 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 RANBP10Q6VN20 620 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ZNF704Q6ZNC4 412 aaPredicted RBP4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 GADL1Q6ZQY3 521 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 LINC00299Q6ZSB3 139 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 KCTD20Q7Z5Y7 419 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 SATL1Q86VE3 508 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ZNF677Q86XU0 584 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 TICAM1Q8IUC6 712 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 SLC38A6Q8IZM9 456 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 VPS52Q8N1B4 723 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 CENPSQ8N2Z9 138 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 MARVELD2Q8N4S9 558 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 RBMXL3Q8N7X1 1067 aaKnown RBP4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 LINC00301Q8NCQ3 95 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 PJA1Q8NG27 643 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 SLC22A8Q8TCC7 542 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ADAMTS16Q8TE57 1224 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 HSPH1Q92598 858 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 C11orf24Q96F05 449 aaPredicted RBP4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 CLPTM1LQ96KA5 538 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 CALN1Q9BXU9 219 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 TINAGL1Q9GZM7 467 aaPredicted RBP4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 CLPBQ9H078 707 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 TMEM60Q9H2L4 133 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 EPB41L5Q9HCM4 733 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 RIC8AQ9NPQ8 531 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 WASH6PQ9NQA3 447 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 FGFR1OP2Q9NVK5 253 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 NDE1Q9NXR1 346 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 LIMA1Q9UHB6 759 aaKnown RBP4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 MOSPD1Q9UJG1 213 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 TUBD1Q9UJT1 453 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 AGO2Q9UKV8 859 aaKnown RBP4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 SNX7Q9UNH6 387 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 HPSEQ9Y251 543 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 TMEM5Q9Y2B1 443 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 SLC4A4Q9Y6R1 1079 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 ARAP3Q8WWN8 1544 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 CARMIL3Q8ND23 1372 aa4.5□□□□□ -1.69
PIKFYVE-209ENST00000477200 MAGI1Q96QZ7 1491 aaPredicted RBP4.49□□□□□ -1.69
PIKFYVE-209ENST00000477200 ZNF532Q9HCE3 1301 aa4.49□□□□□ -1.69
PIKFYVE-209ENST00000477200 KDM3AQ9Y4C1 1321 aa4.49□□□□□ -1.69
PIKFYVE-209ENST00000477200 SAMD9LQ8IVG5 1584 aa4.49□□□□□ -1.69
PIKFYVE-209ENST00000477200 NEURL4Q96JN8 1562 aa4.49□□□□□ -1.69
PIKFYVE-209ENST00000477200 MYH13Q9UKX3 1938 aa4.49□□□□□ -1.69
PIKFYVE-209ENST00000477200 A0A1W2PQ67 120 aa4.49□□□□□ -1.69
PIKFYVE-209ENST00000477200 A0A1W2PRQ8 180 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms