RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 SCYL1Q96KG9 808 aa19.05■□□□□ 0.64
SYF2-204ENST00000476231 MRPL46Q9H2W6 279 aaKnown RBP19.05■□□□□ 0.64
SYF2-204ENST00000476231 MRGBPQ9NV56 204 aa19.05■□□□□ 0.64
SYF2-204ENST00000476231 CPSF2Q9P2I0 782 aaKnown RBP19.05■□□□□ 0.64
SYF2-204ENST00000476231 YBX2Q9Y2T7 364 aaKnown RBP19.05■□□□□ 0.64
SYF2-204ENST00000476231 ANKRD36A6QL64 1941 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.04■□□□□ 0.64
SYF2-204ENST00000476231 C2orf81A6NN90 581 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 K7ERQ8 282 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 TK2O00142 265 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 PHGDHO43175 533 aaKnown RBP19.04■□□□□ 0.64
SYF2-204ENST00000476231 FZD6O60353 706 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 GLP2RO95838 553 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 THRAP10827 490 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 COX4I1P13073 169 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 ANPEPP15144 967 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 TFEBP19484 476 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 MAGEA10P43363 369 aaPredicted RBP19.04■□□□□ 0.64
SYF2-204ENST00000476231 ZNF140P52738 457 aaPredicted RBP19.04■□□□□ 0.64
SYF2-204ENST00000476231 SLC9B1Q4ZJI4 515 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 PITRM1Q5JRX3 1037 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 ATXN7L2Q5T6C5 722 aaPredicted RBP19.04■□□□□ 0.64
SYF2-204ENST00000476231 ADGRD2Q7Z7M1 963 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 GPATCH11Q8N954 259 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 OR13C4Q8NGS5 318 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 SCG3Q8WXD2 468 aaKnown RBP19.04■□□□□ 0.64
SYF2-204ENST00000476231 IRF7Q92985 503 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 MIEF2Q96C03 454 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 CCDC126Q96EE4 140 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 PIDD1Q9HB75 910 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 SPHK2Q9NRA0 654 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 HACD3Q9P035 362 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 MRPS23Q9Y3D9 190 aaKnown RBP19.04■□□□□ 0.64
SYF2-204ENST00000476231 MAP3K7O43318 606 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 SMAD6O43541 496 aaKnown RBP19.04■□□□□ 0.64
SYF2-204ENST00000476231 CEBPBP17676 345 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 SAT1P21673 171 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 MRPS35P82673 323 aaKnown RBP19.04■□□□□ 0.64
SYF2-204ENST00000476231 SLC25A3Q00325 362 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 ARL13AQ5H913 290 aaPredicted RBP19.04■□□□□ 0.64
SYF2-204ENST00000476231 MRNIPQ6NTE8 343 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 CNSTQ6PJW8 725 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 ACAD11Q709F0 780 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 APLFQ8IW19 511 aaPredicted RBP19.04■□□□□ 0.64
SYF2-204ENST00000476231 MDGA1Q8NFP4 955 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 MAPK15Q8TD08 544 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 TSPAN17Q96FV3 270 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 ELMO2Q96JJ3 720 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 CLPTM1LQ96KA5 538 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 ZSWIM3Q96MP5 696 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 LMAN2LQ9H0V9 348 aa19.04■□□□□ 0.64
SYF2-204ENST00000476231 CCDC162PA2VCL2 907 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 CCL22O00626 93 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 DCXO43602 365 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 BUD23O43709 281 aaKnown RBP19.03■□□□□ 0.64
SYF2-204ENST00000476231 DLX3O60479 287 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 PIGNO95427 931 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 PAPLNO95428 1278 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 GOT2P00505 430 aaKnown RBP19.03■□□□□ 0.64
SYF2-204ENST00000476231 HLA-FP30511 346 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 SLC12A2P55011 1212 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 HERC3Q15034 1050 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 IRGCQ6NXR0 463 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 PIWIL4Q7Z3Z4 852 aaKnown RBP19.03■□□□□ 0.64
SYF2-204ENST00000476231 CEP97Q8IW35 865 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 MFSD6LQ8IWD5 586 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 OR4L1Q8NH43 312 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 SMG7Q92540 1137 aaKnown RBP19.03■□□□□ 0.64
SYF2-204ENST00000476231 FAM136AQ96C01 138 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 CDKN2AIPNLQ96HQ2 116 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 BBS2Q9BXC9 721 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 TM6SF2Q9BZW4 377 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 CORO1CQ9ULV4 474 aaPredicted RBP19.03■□□□□ 0.64
SYF2-204ENST00000476231 BPTFQ12830 3046 aa19.03■□□□□ 0.64
SYF2-204ENST00000476231 RGSL1A5PLK6 1076 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 NEDD8-MDP1E9PL57 170 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 SLC9A3R1O14745 358 aaPredicted RBP19.02■□□□□ 0.64
SYF2-204ENST00000476231 AURKAO14965 403 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 CD3EAPO15446 510 aaKnown RBP19.02■□□□□ 0.64
SYF2-204ENST00000476231 GRID2O43424 1007 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 ZBTB14O43829 449 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 IGSF6O95976 241 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 S1PR4O95977 384 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 ITGAXP20702 1163 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 OGNP20774 298 aaKnown RBP19.02■□□□□ 0.64
SYF2-204ENST00000476231 LPOP22079 712 aaPredicted RBP19.02■□□□□ 0.64
SYF2-204ENST00000476231 SLC26A3P40879 764 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 ABL2P42684 1182 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 NAGLUP54802 743 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 SESN3P58005 492 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 DUSP6Q16828 381 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 SH2D4BQ5SQS7 431 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 ARMC12Q5T9G4 340 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 KIRREL3Q8IZU9 778 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 PHTF2Q8N3S3 785 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 RP9Q8TA86 221 aaKnown RBP19.02■□□□□ 0.64
SYF2-204ENST00000476231 DTX3LQ8TDB6 740 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 NXNL1Q96CM4 212 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 OMDQ99983 421 aa19.02■□□□□ 0.64
SYF2-204ENST00000476231 ZNF385DQ9H6B1 395 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms