RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 CLTBP09497 229 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 T-ENOLP0DO92 83 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 IGHV4-30-4P0DP06 118 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 ZNF12P17014 697 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 TKTP29401 623 aaKnown RBP4.96□□□□□ -1.62
PTCD3-211ENST00000476215 CDH8P55286 799 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 ADIPOQQ15848 244 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 KLHL22Q53GT1 634 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 KCTD18Q6PI47 426 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-211ENST00000476215 SEPT14Q6ZU15 432 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 CHST9Q7L1S5 443 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 CACNA2D4Q7Z3S7 1137 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 SPATA2LQ8IUW3 424 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-211ENST00000476215 TEX11Q8IYF3 940 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 CLEC18CQ8NCF0 446 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 THOC3Q96J01 351 aaKnown RBP4.96□□□□□ -1.62
PTCD3-211ENST00000476215 FIZ1Q96SL8 496 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 HIPK2Q9H2X6 1198 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 GHITMQ9H3K2 345 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 SMARCAD1Q9H4L7 1026 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 MMP25Q9NPA2 562 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 ACSS1Q9NUB1 689 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-211ENST00000476215 SESN1Q9Y6P5 492 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 TRIP12Q14669 1992 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-211ENST00000476215 PRSS47A8MTI9 375 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 H3BQ06 376 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-211ENST00000476215 VILLO15195 856 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 GAGE7O76087 117 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 OR2C1O95371 312 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 EGFP01133 1207 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 GAGE12FP0CL80 117 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 GAGE12GP0CL81 117 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 GAGE12IP0CL82 117 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 FCGR1AP12314 374 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 RRM1P23921 792 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 MCM3P25205 808 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 BDKRB2P30411 391 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 UBA7P41226 1012 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 PEX5P50542 639 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 ZBED6P86452 979 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 TFAP4Q01664 338 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 GAGE1Q13065 139 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 GAGE4Q13068 117 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 MYBPHQ13203 477 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 MEA1Q16626 185 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 ATP13A5Q4VNC0 1218 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 LRIF1Q5T3J3 769 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 DUS1LQ6P1R4 473 aaKnown RBP4.95□□□□□ -1.62
PTCD3-211ENST00000476215 RHBDF2Q6PJF5 856 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 CREB3L2Q70SY1 520 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 FASTKD5Q7L8L6 764 aaKnown RBP4.95□□□□□ -1.62
PTCD3-211ENST00000476215 TICAM1Q8IUC6 712 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 ELMOD3Q96FG2 381 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 MED30Q96HR3 178 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 C3orf30Q96M34 536 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 OR1F2PQ96R84 312 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 CWC15Q9P013 229 aaKnown RBP4.95□□□□□ -1.62
PTCD3-211ENST00000476215 FBXO2Q9UK22 296 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-211ENST00000476215 VPS28Q9UK41 221 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 ZNF215Q9UL58 517 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-211ENST00000476215 LRP12Q9Y561 859 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 NFS1Q9Y697 457 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 NACADO15069 1562 aa4.95□□□□□ -1.62
PTCD3-211ENST00000476215 A8MZ25 164 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 HMGB1P1B2RPK0 211 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-211ENST00000476215 GFPT2O94808 682 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 SRCP12931 536 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 TMEM11P17152 192 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 HOXC9P31274 260 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 HOXD13P35453 343 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 GARSP41250 739 aaKnown RBP4.94□□□□□ -1.62
PTCD3-211ENST00000476215 PRCPP42785 496 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 PDLIM4P50479 330 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 HNRNPH2P55795 449 aaKnown RBP4.94□□□□□ -1.62
PTCD3-211ENST00000476215 DSCR9P59020 149 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 CSNK2A1P68400 391 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-211ENST00000476215 MC1RQ01726 317 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 ACSM2AQ08AH3 577 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 GRIK2Q13002 908 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 NFATC4Q14934 902 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 CALCRLQ16602 461 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 SPATA1Q5VX52 437 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 RUSC1-AS1Q66K80 236 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 ACSM2BQ68CK6 577 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 RGMBQ6NW40 437 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 KRBA2Q6ZNG9 492 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 RNF168Q8IYW5 571 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-211ENST00000476215 ADGRF2Q8IZF7 708 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 CSNK2A3Q8NEV1 391 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 WFIKKN2Q8TEU8 576 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 ORAI1Q96D31 301 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 SCMH1Q96GD3 660 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 GRAMD2BQ96HH9 432 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 SEPT5Q99719 369 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-211ENST00000476215 TM6SF1Q9BZW5 370 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 SEBOXQ9HB31 216 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-211ENST00000476215 SETD4Q9NVD3 440 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 TBC1D29Q9UFV1 150 aa4.94□□□□□ -1.62
PTCD3-211ENST00000476215 GPR34Q9UPC5 381 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms