RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 NSUN5Q96P11 429 aaKnown RBP16.61■□□□□ 0.25
TVP23B-202ENST00000476139 KLF16Q9BXK1 252 aaPredicted RBP16.61■□□□□ 0.25
TVP23B-202ENST00000476139 TBC1D30Q9Y2I9 924 aa16.61■□□□□ 0.25
TVP23B-202ENST00000476139 YIPF1Q9Y548 306 aa16.61■□□□□ 0.25
TVP23B-202ENST00000476139 RAI2Q9Y5P3 530 aa16.61■□□□□ 0.25
TVP23B-202ENST00000476139 PTGDR2Q9Y5Y4 395 aa16.61■□□□□ 0.25
TVP23B-202ENST00000476139 CDH23Q9H251 3354 aa16.61■□□□□ 0.25
TVP23B-202ENST00000476139 A0A1B0GVM2 712 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 MS4A2Q01362 244 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 MTA1Q13330 715 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 PDAP1Q13442 181 aaKnown RBP16.6■□□□□ 0.25
TVP23B-202ENST00000476139 SLC22A9Q8IVM8 553 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 EFHBQ8N7U6 833 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 PEX13Q92968 403 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 PLD4Q96BZ4 506 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 VWCEQ96DN2 955 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 C3orf30Q96M34 536 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 GBP5Q96PP8 586 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 AARSD1Q9BTE6 412 aaKnown RBP16.6■□□□□ 0.25
TVP23B-202ENST00000476139 MEAF6Q9HAF1 191 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 FBRSL1Q9HCM7 1045 aaKnown RBP16.6■□□□□ 0.25
TVP23B-202ENST00000476139 CHD5Q8TDI0 1954 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 VEGFBP49765 207 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 HERVK_113P63132 956 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 TWF1Q12792 350 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 DNAJB7Q7Z6W7 309 aaPredicted RBP16.6■□□□□ 0.25
TVP23B-202ENST00000476139 CARNMT1Q8N4J0 409 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 PTGR2Q8N8N7 351 aaPredicted RBP16.6■□□□□ 0.25
TVP23B-202ENST00000476139 NAT14Q8WUY8 206 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 PPP2R3CQ969Q6 453 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 MYRFLQ96LU7 910 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 ERVK-6Q9BXR3 956 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 TRPC7Q9HCX4 862 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 CCDC167Q9P0B6 97 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 ASB3Q9Y575 518 aa16.6■□□□□ 0.25
TVP23B-202ENST00000476139 A0A1B0GTL3 188 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 ANKRD66B4E2M5 251 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 SLC26A3P40879 764 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 FOXA1P55317 472 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 TLE2Q04725 743 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 TYSND1Q2T9J0 566 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 PSAPL1Q6NUJ1 521 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 KBTBD6Q86V97 674 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 SLC30A3Q99726 388 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 TMCC1O94876 653 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 PRAMEF12O95522 483 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 SMAD3P84022 425 aaKnown RBP16.59■□□□□ 0.25
TVP23B-202ENST00000476139 ART3Q13508 389 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 LAMB3Q13751 1172 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 CEACAM7Q14002 265 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 TAF1AQ15573 450 aaPredicted RBP16.59■□□□□ 0.25
TVP23B-202ENST00000476139 MMEL1Q495T6 779 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 SETD3Q86TU7 594 aaPredicted RBP16.59■□□□□ 0.25
TVP23B-202ENST00000476139 PCDH20Q8N6Y1 951 aaKnown RBP16.59■□□□□ 0.25
TVP23B-202ENST00000476139 OVCA2Q8WZ82 227 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 RNF208Q9H0X6 261 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 WDR41Q9HAD4 459 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 FKBPLQ9UIM3 349 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 C2orf81A6NN90 581 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 H0Y626 953 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 PRRG1O14668 218 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 TBL1XO60907 577 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 SRP72O76094 671 aaKnown RBP16.59■□□□□ 0.25
TVP23B-202ENST00000476139 RHOBTB1O94844 696 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 VCLP18206 1134 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 TRAF2Q12933 501 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 MED21Q13503 144 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 TRIM60Q495X7 471 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 TXNDC8Q6A555 127 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 WFDC5Q8TCV5 224 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 LPGAT1Q92604 370 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 L3HYPDHQ96EM0 354 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 ZFRQ96KR1 1074 aaKnown RBP16.59■□□□□ 0.25
TVP23B-202ENST00000476139 EFCAB1Q9HAE3 211 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 STK39Q9UEW8 545 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 GIMAP2Q9UG22 337 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 PCDHGB4Q9UN71 923 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 FCF1Q9Y324 198 aaKnown RBP16.59■□□□□ 0.25
TVP23B-202ENST00000476139 PCDHGB5Q9Y5G0 923 aa16.59■□□□□ 0.25
TVP23B-202ENST00000476139 K7ERQ8 282 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 UBDO15205 165 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 SOD2P04179 222 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 MBL2P11226 248 aaPredicted RBP16.58■□□□□ 0.24
TVP23B-202ENST00000476139 SUOXP51687 545 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 FLOT2Q14254 428 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 UGT3A2Q3SY77 523 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 C16orf89Q6UX73 402 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 CHSY3Q70JA7 882 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 ARL14EPQ8N8R7 260 aaPredicted RBP16.58■□□□□ 0.24
TVP23B-202ENST00000476139 OR9I1Q8NGQ6 314 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 OR6K2Q8NGY2 324 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 BIRC8Q96P09 236 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 COPS7BQ9H9Q2 264 aaPredicted RBP16.58■□□□□ 0.24
TVP23B-202ENST00000476139 PAK6Q9NQU5 681 aaPredicted RBP16.58■□□□□ 0.24
TVP23B-202ENST00000476139 PAPOLBQ9NRJ5 636 aaKnown RBP16.58■□□□□ 0.24
TVP23B-202ENST00000476139 DNAJC15Q9Y5T4 150 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 NDUFS3O75489 264 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 CDK14O94921 469 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 OGNP20774 298 aaKnown RBP16.58■□□□□ 0.24
TVP23B-202ENST00000476139 ADSLP30566 484 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms