RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 LMBRD1Q9NUN5 540 aa14.42□□□□□ -0.1
CSNK2B-207ENST00000475875 LUZP4Q9P127 313 aa14.42□□□□□ -0.1
CSNK2B-207ENST00000475875 DNAI1Q9UI46 699 aa14.42□□□□□ -0.1
CSNK2B-207ENST00000475875 HOOK1Q9UJC3 728 aaKnown RBP14.42□□□□□ -0.1
CSNK2B-207ENST00000475875 NIPBLQ6KC79 2804 aaeCLIP14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 SSU72P8A0A1W2PR75 194 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 KRT86O43790 486 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 BUB1BO60566 1050 aaPredicted RBP14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 GM2AP17900 193 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 PTMSP20962 102 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 HHEXQ03014 270 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 LRP8Q14114 963 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 PTPN20Q4JDL3 420 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 CYB5D1Q6P9G0 228 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 DPPA4Q7L190 304 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 ZNF761Q86XN6 746 aaPredicted RBP14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 FMR1NBQ8N0W7 255 aaPredicted RBP14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 CT55Q8WUE5 264 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 FAM81BQ96LP2 452 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 BARD1Q99728 777 aaKnown RBP14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 GTPBP4Q9BZE4 634 aaKnown RBP14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 GOLPH3LQ9H4A5 285 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 ASF1BQ9NVP2 202 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 LHX3Q9UBR4 397 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 OR12D3Q9UGF7 316 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 SVILO95425 2214 aa14.41□□□□□ -0.1
CSNK2B-207ENST00000475875 ARGFXA6NJG6 315 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 RASA4BC9J798 803 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 RASA4O43374 803 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 FGF5P12034 268 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 PTPN4P29074 926 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 POLR2LP62875 67 aaKnown RBP14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 CDK3Q00526 305 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 TESK1Q15569 626 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 RWDD4Q6NW29 188 aaKnown RBP14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 ZSWIM9Q86XI8 627 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 RASGRP3Q8IV61 690 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 SMYD4Q8IYR2 804 aaPredicted RBP14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 PELI3Q8N2H9 469 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 OR2M4Q96R27 311 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 ACP6Q9NPH0 428 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 LNPEPQ9UIQ6 1025 aa14.4□□□□□ -0.1
CSNK2B-207ENST00000475875 PRSS44E7EML9 344 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 C9P02748 559 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 LPOP22079 712 aaPredicted RBP14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 SERPINA4P29622 427 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 PRCPP42785 496 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 YBEYP58557 167 aaPredicted RBP14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 CHAF1BQ13112 559 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 ACOX1Q15067 660 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 KRBA2Q6ZNG9 492 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 FAM131BQ86XD5 332 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 ZNF354CQ86Y25 554 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 XYLT1Q86Y38 959 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 PASD1Q8IV76 773 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 AVL9Q8NBF6 648 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 ST6GALNAC3Q8NDV1 305 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 ECHDC3Q96DC8 303 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 TBC1D31Q96DN5 1066 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 NUS1Q96E22 293 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 EXOC2Q96KP1 924 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 C9orf72Q96LT7 481 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 COQ10AQ96MF6 247 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 CEP63Q96MT8 703 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 TIGD1Q96MW7 591 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 FCRL4Q96PJ5 515 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 OR6C1Q96RD1 312 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 RANBP9Q96S59 729 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 SMAD5Q99717 465 aaKnown RBP14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 ATP13A3Q9H7F0 1226 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 UBE2TQ9NPD8 197 aaPredicted RBP14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 C5AR2Q9P296 337 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 KLHL3Q9UH77 587 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 NEU3Q9UQ49 428 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 CROCCQ5TZA2 2017 aa14.39□□□□□ -0.11
CSNK2B-207ENST00000475875 DCHS2Q6V1P9 2916 aa14.38□□□□□ -0.11
CSNK2B-207ENST00000475875 SPAG6O75602 509 aa14.38□□□□□ -0.11
CSNK2B-207ENST00000475875 CSNK1DP48730 415 aa14.38□□□□□ -0.11
CSNK2B-207ENST00000475875 RPS15P62841 145 aaKnown RBP14.38□□□□□ -0.11
CSNK2B-207ENST00000475875 CYTH1Q15438 398 aa14.38□□□□□ -0.11
CSNK2B-207ENST00000475875 ARCQ7LC44 396 aa14.38□□□□□ -0.11
CSNK2B-207ENST00000475875 CAMK1DQ8IU85 385 aa14.38□□□□□ -0.11
CSNK2B-207ENST00000475875 GLIS1Q8NBF1 620 aa14.38□□□□□ -0.11
CSNK2B-207ENST00000475875 FDCSPQ8NFU4 85 aa14.38□□□□□ -0.11
CSNK2B-207ENST00000475875 B3GNT3Q9Y2A9 372 aa14.38□□□□□ -0.11
CSNK2B-207ENST00000475875 ANKHD1Q8IWZ3 2542 aaKnown RBP14.38□□□□□ -0.11
CSNK2B-207ENST00000475875 A0A1B0GTL3 188 aa14.37□□□□□ -0.11
CSNK2B-207ENST00000475875 LILRA5A6NI73 299 aa14.37□□□□□ -0.11
CSNK2B-207ENST00000475875 LRRTM2O43300 516 aa14.37□□□□□ -0.11
CSNK2B-207ENST00000475875 LRIG2O94898 1065 aa14.37□□□□□ -0.11
CSNK2B-207ENST00000475875 SLC2A4P14672 509 aa14.37□□□□□ -0.11
CSNK2B-207ENST00000475875 FLT3P36888 993 aa14.37□□□□□ -0.11
CSNK2B-207ENST00000475875 GABRB2P47870 512 aa14.37□□□□□ -0.11
CSNK2B-207ENST00000475875 PMS1P54277 932 aaKnown RBP14.37□□□□□ -0.11
CSNK2B-207ENST00000475875 CDK18Q07002 472 aa14.37□□□□□ -0.11
CSNK2B-207ENST00000475875 NFATC2Q13469 925 aa14.37□□□□□ -0.11
CSNK2B-207ENST00000475875 LAMB3Q13751 1172 aa14.37□□□□□ -0.11
CSNK2B-207ENST00000475875 PARP15Q460N3 678 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms