RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ZSWIM9Q86XI8 627 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 GLIS1Q8NBF1 620 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 OR4C6Q8NH72 309 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 NSMCE3Q96MG7 304 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 ZNF599Q96NL3 588 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 CAAP1Q9H8G2 361 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 C10orf88Q9H8K7 445 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 UCKL1Q9NWZ5 548 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 GOLGA6AQ9NYA3 693 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 SEPT10Q9P0V9 454 aa15.67■□□□□ 0.1
CPSF3-203ENST00000475482 GOLGA8CPA6NN73 597 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 E7EVH7 732 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 NEMP1O14524 444 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 TRAFD1O14545 582 aaPredicted RBP15.66■□□□□ 0.1
CPSF3-203ENST00000475482 MUSKO15146 869 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 MATN3O15232 486 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 MMP20O60882 483 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 TM7SF2O76062 418 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 CSF2P04141 144 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 NME1P15531 152 aaKnown RBP15.66■□□□□ 0.1
CPSF3-203ENST00000475482 CKMT2P17540 419 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 ACP1P24666 158 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 ECHS1P30084 290 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 SARNPP82979 210 aaKnown RBP15.66■□□□□ 0.1
CPSF3-203ENST00000475482 CDK16Q00536 496 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 ELP6Q0PNE2 266 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 ILKQ13418 452 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 PARP6Q2NL67 630 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 LRRC73Q5JTD7 316 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 ANKRD20A2Q5SQ80 823 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 RNASEH2BQ5TBB1 312 aaKnown RBP15.66■□□□□ 0.1
CPSF3-203ENST00000475482 ANKRD20A1Q5TYW2 823 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 ANKRD20A3Q5VUR7 823 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 DHRS13Q6UX07 377 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 ZDHHC24Q6UX98 284 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 PTAR1Q7Z6K3 402 aaPredicted RBP15.66■□□□□ 0.1
CPSF3-203ENST00000475482 SRLQ86TD4 932 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 TMPRSS12Q86WS5 348 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 CAMK1DQ8IU85 385 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 GSPT2Q8IYD1 628 aaKnown RBP15.66■□□□□ 0.1
CPSF3-203ENST00000475482 MREGQ8N565 214 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 TP53I13Q8NBR0 393 aaPredicted RBP15.66■□□□□ 0.1
CPSF3-203ENST00000475482 PHACTR1Q9C0D0 580 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 SP110Q9HB58 689 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 RAB6BQ9NRW1 208 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 KLHL8Q9P2G9 620 aaPredicted RBP15.66■□□□□ 0.1
CPSF3-203ENST00000475482 DKK4Q9UBT3 224 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 KLF15Q9UIH9 416 aa15.66■□□□□ 0.1
CPSF3-203ENST00000475482 TAF4O00268 1085 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 TOR1BO14657 336 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 PSMD3O43242 534 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 SIGLEC6O43699 453 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 MAFKO60675 156 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 RFPL3O75679 317 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 CR2P20023 1033 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 IGFALSP35858 605 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 RENBPP51606 427 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 HNRNPKP61978 463 aaKnown RBP eCLIP15.65■□□□□ 0.1
CPSF3-203ENST00000475482 YPEL5P62699 121 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 IFI35P80217 286 aaPredicted RBP15.65■□□□□ 0.1
CPSF3-203ENST00000475482 SLC10A7Q0GE19 358 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 EIF2B5Q13144 721 aaKnown RBP15.65■□□□□ 0.1
CPSF3-203ENST00000475482 PRPSAP1Q14558 356 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 TEX44Q53QW1 395 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 TMCO4Q5TGY1 634 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 B4GALNT4Q76KP1 1039 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 PID1Q7Z2X4 250 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 PARGQ86W56 976 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 CACTIN-AS1Q8N1I8 211 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 BBS5Q8N3I7 341 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 FAM181AQ8N9Y4 354 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 CCDC110Q8TBZ0 833 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 CXorf40AQ8TE69 158 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 ZCCHC14Q8WYQ9 949 aaKnown RBP15.65■□□□□ 0.1
CPSF3-203ENST00000475482 PKNOX2Q96KN3 472 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 CINPQ9BW66 212 aaPredicted RBP15.65■□□□□ 0.1
CPSF3-203ENST00000475482 VIPAS39Q9H9C1 493 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 PCDH12Q9NPG4 1184 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 SEPT3Q9UH03 358 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 CSNK1G3Q9Y6M4 447 aa15.65■□□□□ 0.1
CPSF3-203ENST00000475482 URB1O60287 2271 aaKnown RBP15.64■□□□□ 0.09
CPSF3-203ENST00000475482 FAM208BQ5VWN6 2430 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 ERI2A8K979 691 aaKnown RBP15.64■□□□□ 0.09
CPSF3-203ENST00000475482 SCAMP1O15126 338 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 EIF3HO15372 352 aaKnown RBP eCLIP15.64■□□□□ 0.09
CPSF3-203ENST00000475482 PPFIA2O75334 1257 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 CCNB1P14635 433 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 PTPN3P26045 913 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 HSPA9P38646 679 aaKnown RBP15.64■□□□□ 0.09
CPSF3-203ENST00000475482 MMP12P39900 470 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 MAGEA6P43360 314 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 LMAN1P49257 510 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 ARL4CP56559 192 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 AP1S1P61966 158 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 DHX9Q08211 1270 aaKnown RBP15.64■□□□□ 0.09
CPSF3-203ENST00000475482 WASHC5Q12768 1159 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 GPS2Q13227 327 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 PDE1CQ14123 709 aaPredicted RBP15.64■□□□□ 0.09
CPSF3-203ENST00000475482 LBRQ14739 615 aaKnown RBP15.64■□□□□ 0.09
CPSF3-203ENST00000475482 CASP8Q14790 479 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms