RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 E9PI62 339 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 NPIPB8E9PQR5 432 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 HAS3O00219 553 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 QSOX1O00391 747 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TXNDC9O14530 226 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 VILLO15195 856 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 COCHO43405 550 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 DENRO43583 198 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 B3GALT2O43825 422 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PGK1P00558 417 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SERPINA3P01011 423 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PDGFAP04085 211 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 ENO3P13929 434 aaPredicted RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 MSH3P20585 1137 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 NT5EP21589 574 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 MAOBP27338 520 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 GPX4P36969 197 aaPredicted RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 TALDO1P37837 337 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TECP42680 631 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PPP3CCP48454 512 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CCT3P49368 545 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 PDE1AP54750 535 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 STX5Q13190 355 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 IRF4Q15306 451 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 BMT2Q1RMZ1 405 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 UAP1L1Q3KQV9 507 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 GARNL3Q5VVW2 1013 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TDRD10Q5VZ19 366 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 ZSCAN25Q6NSZ9 544 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 COLCA1Q6ZS62 124 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 COPS6Q7L5N1 327 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 ANKS1BQ7Z6G8 1248 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 DCP2Q8IU60 420 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 ADSSL1Q8N142 457 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CYP4Z2PQ8N1L4 340 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 NXPE1Q8N323 547 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 KDM1BQ8NB78 822 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 DAGLBQ8NCG7 672 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CLRN3Q8NCR9 226 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 OR4D10Q8NGI6 311 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PAQR8Q8TEZ7 354 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 BRI3BPQ8WY22 251 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 MARVELD3Q96A59 401 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SHISA4Q96DD7 197 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 MRPL48Q96GC5 212 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 COX4I2Q96KJ9 171 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 ZNF317Q96PQ6 595 aaPredicted RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 MTG1Q9BT17 334 aaPredicted RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 IMPG2Q9BZV3 1241 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SLC6A16Q9GZN6 736 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 RNF32Q9H0A6 362 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 RNPEPQ9H4A4 650 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TDRD3Q9H7E2 651 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 RMND5AQ9H871 391 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 UNKLQ9H9P5 680 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 KCNMB3Q9NPA1 279 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 LMBRD1Q9NUN5 540 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 UFSP2Q9NUQ7 469 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SPATA6Q9NWH7 488 aaPredicted RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 CHRNA9Q9UGM1 479 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SRRDQ9UH36 339 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 AMFRQ9UKV5 643 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 STAP1Q9ULZ2 295 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 LIPT1Q9Y234 373 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 COQ6Q9Y2Z9 468 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CLUHO75153 1309 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 CPSF1Q10570 1443 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 A0A1W2PQ09 198 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 GNB5O14775 395 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 AIM2O14862 343 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 LRRTM2O43300 516 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 CALUO43852 315 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 SLC43A1O75387 559 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 PSMD10O75832 226 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ATE1O95260 518 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ETS1P14921 441 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 BRAFP15056 766 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 TCP1P17987 556 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 ATP6V1C1P21283 382 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 FGFR2P21802 821 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 CORO1AP31146 461 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 CRATP43155 626 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 GPD2P43304 727 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 GATA4P43694 442 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 UBE2G2P60604 165 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 NOMO3P69849 1222 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ECT2LQ008S8 904 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 CD300CQ08708 224 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ZNF543Q08ER8 600 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 DMP1Q13316 513 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 FSCN1Q16658 493 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 TMEM35AQ53FP2 167 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 NOMO2Q5JPE7 1267 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 C1orf94Q6P1W5 598 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 KIAA1324Q6UXG2 1013 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 FKBP9P1Q75LS8 142 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 HEATR3Q7Z4Q2 680 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 CROCCP3Q8IVE0 287 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 MISPQ8IVT2 679 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 PDIK1LQ8N165 341 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms