RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 GLIS2Q9BZE0 524 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 IL25Q9H293 177 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 SLCO5A1Q9H2Y9 848 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 MAGIXQ9H6Y5 334 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 SH2D4AQ9H788 454 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 FKRPQ9H9S5 495 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 SMC4Q9NTJ3 1288 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 OCIAD1Q9NX40 245 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 SNX9Q9Y5X1 595 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 FAM237AA0A1B0GTK4 181 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 LIPT2A6NK58 231 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 SOCS6O14544 535 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 HS3ST1O14792 307 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 SPINT2O43291 252 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 KRT86O43790 486 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 HNRNPCL1O60812 293 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 RNASEH2AO75792 299 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 NFKBIAP25963 317 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 BDKRB2P30411 391 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 HNRNPH2P55795 449 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 RRP1P56182 461 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 EEF1A1P68104 462 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 DDR1Q08345 913 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 TRAF3Q13114 568 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 MAD2L1Q13257 205 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 FRG1Q14331 258 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 KRT81Q14533 505 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 PCGF3Q3KNV8 242 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 CXorf66Q5JRM2 361 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 DCST1Q5T197 706 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 EEF1A1P5Q5VTE0 462 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 WBP2NLQ6ICG8 309 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 ANKRD54Q6NXT1 300 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 FBXO46Q6PJ61 603 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 RHBDF2Q6PJF5 856 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 SLC36A4Q6YBV0 504 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 C16orf82Q7Z2V1 217 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 PXKQ7Z7A4 578 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 SFR1Q86XK3 245 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 RPAP2Q8IXW5 612 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 CNTROBQ8N137 903 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 TMTC2Q8N394 836 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 PGBD5Q8N414 524 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 NGEFQ8N5V2 710 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 PDILTQ8N807 584 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 NEXN-AS1Q8NBZ9 246 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 LILRB1Q8NHL6 650 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 TANKQ92844 425 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 TAAR8Q969N4 342 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 PGAM5Q96HS1 289 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 QRFPRQ96P65 431 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 CTAGE1Q96RT6 745 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 ACOX2Q99424 681 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 C1QTNF1Q9BXJ1 281 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 TKTL2Q9H0I9 626 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 DDX31Q9H8H2 851 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 EBF2Q9HAK2 575 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 RRP7BPQ9NSQ0 103 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 HCFC1R1Q9NWW0 138 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 SLC9A2Q9UBY0 812 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 FBXW11Q9UKB1 542 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 MKLN1Q9UL63 735 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 ACSL5Q9ULC5 683 aa3.28□□□□□ -1.88
ECHDC1-213ENST00000474240 ZNF644Q9H582 1327 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 SAA2-SAA4A0A096LPE2 208 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 PI4KAP2A4QPH2 592 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 PGPEP1LA6NFU8 196 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 SMTNL1A8MU46 457 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 PRSS44E7EML9 344 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 TGFB1I1O43294 461 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 ZBED4O75132 1171 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 WDHD1O75717 1129 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 KRT36O76013 467 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 NKX2-2O95096 273 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 PMS2P2O95744 297 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 FTCDO95954 541 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 HIST1H2ABP04908 130 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 CYC1P08574 325 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 SNRNP70P08621 437 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 LINC00271P0C7V0 271 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 HIST1H2ADP20671 130 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 MT3P25713 68 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 ITGB8P26012 769 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 HOXA13P31271 388 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 ICAM3P32942 547 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 IL15P40933 162 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 PIK3CAP42336 1068 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 RXRGP48443 463 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 TERF1P54274 439 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 F2RL1P55085 397 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 DCAF7P61962 342 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 ACSM2AQ08AH3 577 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 AIMP2Q13155 320 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 KRT32Q14532 448 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 SF3B4Q15427 424 aaKnown RBP eCLIP3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 MAPRE1Q15691 268 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 NAB2Q15742 525 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 C2orf68Q2NKX9 166 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 COL28A1Q2UY09 1125 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms