RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 TMEM139Q8IV31 216 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 NAT6Q93015 286 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 HAUS1Q96CS2 278 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 IMP4Q96G21 291 aaKnown RBP17.88■□□□□ 0.45
UPF3A-203ENST00000474056 RBM41Q96IZ5 413 aaKnown RBP17.88■□□□□ 0.45
UPF3A-203ENST00000474056 TRIB3Q96RU7 358 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 SLC25A51Q9H1U9 297 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 RAXQ9Y2V3 346 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 MT-CYBP00156 380 aaPredicted RBP17.87■□□□□ 0.45
UPF3A-203ENST00000474056 CTNNA1P35221 906 aaKnown RBP17.87■□□□□ 0.45
UPF3A-203ENST00000474056 RTP5Q14D33 572 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 PCSK7Q16549 785 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 DOK6Q6PKX4 331 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 ZNF765Q7L2R6 523 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 TRIM74Q86UV6 250 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 ZC3H18Q86VM9 953 aaKnown RBP17.87■□□□□ 0.45
UPF3A-203ENST00000474056 SFTPA2Q8IWL1 248 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 RCOR2Q8IZ40 523 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 EXD1Q8NHP7 514 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 SPATA22Q8NHS9 363 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 TFB1MQ8WVM0 346 aaKnown RBP17.87■□□□□ 0.45
UPF3A-203ENST00000474056 TADA1Q96BN2 335 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 DEPDC7Q96QD5 511 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 WDR24Q96S15 920 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 CCDC3Q9BQI4 270 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 MLPHQ9BV36 600 aaPredicted RBP17.87■□□□□ 0.45
UPF3A-203ENST00000474056 GLOD4Q9HC38 313 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 RABGEF1Q9UJ41 708 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 SUFUQ9UMX1 484 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.87■□□□□ 0.45
UPF3A-203ENST00000474056 AK5Q9Y6K8 562 aa17.87■□□□□ 0.45
UPF3A-203ENST00000474056 BTNL10A8MVZ5 291 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 NOBOXO60393 691 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 CSO75390 466 aaKnown RBP17.86■□□□□ 0.45
UPF3A-203ENST00000474056 CD68P34810 354 aaPredicted RBP17.86■□□□□ 0.45
UPF3A-203ENST00000474056 GNPDA1P46926 289 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 POLD2P49005 469 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 VAV2P52735 878 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 NAP1L1P55209 391 aaKnown RBP17.86■□□□□ 0.45
UPF3A-203ENST00000474056 PPP2R5EQ16537 467 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 ADAMTSL4Q6UY14 1074 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 NRSN1Q8IZ57 195 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 SPC24Q8NBT2 197 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 FAM46DQ8NEK8 389 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 GPR156Q8NFN8 814 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 P3H4Q92791 437 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 CCDC74AQ96AQ1 378 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 TEKT5Q96M29 485 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 BAG1Q99933 345 aaPredicted RBP17.86■□□□□ 0.45
UPF3A-203ENST00000474056 HERPUD2Q9BSE4 406 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 RIOK2Q9BVS4 552 aaKnown RBP17.86■□□□□ 0.45
UPF3A-203ENST00000474056 HEMGNQ9BXL5 484 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 ADGRE3Q9BY15 652 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 SLC17A4Q9Y2C5 497 aa17.86■□□□□ 0.45
UPF3A-203ENST00000474056 B4DGG1 531 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 PJA2O43164 708 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 PIRTP0C851 137 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 CDC25BP30305 580 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 SPINT3P49223 89 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 CDK18Q07002 472 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 WASHC5Q12768 1159 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 OGFOD3Q6PK18 319 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 BBS12Q6ZW61 710 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 LYSMD3Q7Z3D4 306 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 NLRP8Q86W28 1048 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 NRROSQ86YC3 692 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 RAVER1Q8IY67 606 aaKnown RBP17.85■□□□□ 0.45
UPF3A-203ENST00000474056 GPBAR1Q8TDU6 330 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 EID2BQ96D98 161 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 UBP1Q9NZI7 540 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 PKD2L2Q9NZM6 624 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 TMEM98Q9Y2Y6 226 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 PCDHA3Q9Y5H8 950 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 ST14Q9Y5Y6 855 aa17.85■□□□□ 0.45
UPF3A-203ENST00000474056 A0A0U1RQJ8 604 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 GRID2IPA4D2P6 1211 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 INPP4BO15327 924 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 TLX3O43711 291 aaPredicted RBP17.84■□□□□ 0.45
UPF3A-203ENST00000474056 BRINP1O60477 761 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 USP12O75317 370 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 PYGLP06737 847 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 IVLP07476 585 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 NFKB1P19838 968 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 AK4P27144 223 aaPredicted RBP17.84■□□□□ 0.45
UPF3A-203ENST00000474056 SLC14A2Q15849 920 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 ISXQ2M1V0 245 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 HENMT1Q5T8I9 393 aaKnown RBP17.84■□□□□ 0.45
UPF3A-203ENST00000474056 CCHCR1Q8TD31 782 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 SCARF2Q96GP6 870 aaPredicted RBP17.84■□□□□ 0.45
UPF3A-203ENST00000474056 COX14Q96I36 57 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 HIC2Q96JB3 615 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 CALR3Q96L12 384 aaKnown RBP17.84■□□□□ 0.45
UPF3A-203ENST00000474056 QKIQ96PU8 341 aaKnown RBP eCLIP17.84■□□□□ 0.45
UPF3A-203ENST00000474056 DPEP2Q9H4A9 486 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 SYNDIG1Q9H7V2 258 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 TRNAU1APQ9NX07 287 aaKnown RBP17.84■□□□□ 0.45
UPF3A-203ENST00000474056 SHOC2Q9UQ13 582 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 GPSM3Q9Y4H4 160 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 ENTPD2Q9Y5L3 495 aa17.84■□□□□ 0.45
UPF3A-203ENST00000474056 FAM208BQ5VWN6 2430 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms