RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 TMBIM4Q9HC24 238 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 INTS10Q9NVR2 710 aaKnown RBP10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 IL17CQ9P0M4 197 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 LGALS13Q9UHV8 139 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 MUTYHQ9UIF7 546 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 FBXO5Q9UKT4 447 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 FZD4Q9ULV1 537 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 CORO1CQ9ULV4 474 aaPredicted RBP10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 NOVA2Q9UNW9 492 aaKnown RBP10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 NFS1Q9Y697 457 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 PRR23AA6NEV1 266 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 LRRC72A6NJI9 287 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 E5RI56 91 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 H7C0S8 307 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 AP1G1O43747 822 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 TM7SF2O76062 418 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 SRP72O76094 671 aaKnown RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 CHRM1P11229 460 aaPredicted RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 ZNF7P17097 686 aaPredicted RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 SAT1P21673 171 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 TARSP26639 723 aaKnown RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 AKT1P31749 480 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 HPDP32754 393 aaPredicted RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 SPINT3P49223 89 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 LIG3P49916 1009 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 CLCN5P51795 746 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 STC1P52823 247 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 DCDC1P59894 354 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 SEMG2Q02383 582 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 SGCGQ13326 291 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 CTBP1Q13363 440 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 CRY1Q16526 586 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 GPR33Q49SQ1 333 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 UBAP2Q5T6F2 1119 aaKnown RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 TEDDM1Q5T9Z0 273 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 MROH9Q5TGP6 573 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 KCTD16Q68DU8 428 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 KIAA1211LQ6NV74 962 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 USP30Q70CQ3 517 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 SYT13Q7L8C5 426 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 SNX20Q7Z614 316 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 CILP2Q8IUL8 1156 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 CNTN4Q8IWV2 1026 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 RAVER1Q8IY67 606 aaKnown RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 SRRM1Q8IYB3 904 aaKnown RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 NRSN1Q8IZ57 195 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 UNC5BQ8IZJ1 945 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 CBARPQ8N350 705 aaPredicted RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 C2CD4AQ8NCU7 369 aaPredicted RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM76AQ8TAV0 307 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 DCAKDQ8WVC6 231 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 EZH1Q92800 747 aaPredicted RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 ELMO2Q96JJ3 720 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 CABS1Q96KC9 395 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 AGAP2Q99490 1192 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 SELENOSQ9BQE4 189 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 IER2Q9BTL4 223 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 ZSCAN5AQ9BUG6 496 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 TSSK1BQ9BXA7 367 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 ZCCHC2Q9C0B9 1178 aaKnown RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 CLPBQ9H078 707 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 RHOJQ9H4E5 214 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM83DQ9H4H8 585 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 SUDS3Q9H7L9 328 aaPredicted RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 FBXO6Q9NRD1 293 aaPredicted RBP10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 CTNNAL1Q9UBT7 734 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 TLK1Q9UKI8 766 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 ITM2BQ9Y287 266 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 ATG2BQ96BY7 2078 aa10.24□□□□□ -0.77
PRPF38A-202ENST00000474048 ZNF106Q9H2Y7 1883 aaKnown RBP10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TBC1D3DA0A087WVF3 549 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TBC1D3IA0A087WXS9 549 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TBC1D3EA0A087X179 549 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TBC1D3KA0A087X1G2 549 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 KRBA1A5PL33 1030 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TBC1D3FA6NER0 549 aaPredicted RBP10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 OR51F1A6NGY5 319 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM47DPA6NHR8 397 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 CXorf49A8MYA2 514 aaPredicted RBP10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 CHURC1-FNTBB4DL54 471 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TBC1D3LB9A6J9 549 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TRIM49D1C9J1S8 452 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 ADAM23O75077 832 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 PIAS1O75925 651 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 ITGA2BP08514 1039 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 C1SP09871 688 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TBC1D3HP0C7X1 549 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 CHRNB1P11230 501 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 C6P13671 934 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 BPIP17213 487 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 COL9A1P20849 921 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 LHCGRP22888 699 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TYK2P29597 1187 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 OAS2P29728 719 aaKnown RBP10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 MAGEA9P43362 315 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 ARCN1P48444 511 aaKnown RBP10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 POLD2P49005 469 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 ARSDP51689 593 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 KPNA2P52292 529 aaKnown RBP10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 COPAP53621 1224 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms