RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 NDUFAF2Q8N183 169 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 TEX26Q8N6G2 289 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 NIPA2Q8N8Q9 360 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 SGF29Q96ES7 293 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 SMIM14Q96QK8 99 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 SEMA3CQ99985 751 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 NUDT22Q9BRQ3 303 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 TRIM4Q9C037 500 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 ABCG8Q9H221 673 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 NT5MQ9NPB1 228 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 IP6K2Q9UHH9 426 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 TMEM98Q9Y2Y6 226 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 PCDHB11Q9Y5F2 797 aa11.99□□□□□ -0.49
COL16A1-210ENST00000474000 IGHV5-10-1A0A0J9YXX1 117 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 PPM1DO15297 605 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 FZD6O60353 706 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 SOD1P00441 154 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 CYP1A2P05177 515 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 IVLP07476 585 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 CD48P09326 243 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 CCL4P13236 92 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 SSR1P43307 286 aaKnown RBP11.98□□□□□ -0.49
COL16A1-210ENST00000474000 GPR3P46089 330 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 CSRP3P50461 194 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 NFKB2Q00653 900 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 MMRN1Q13201 1228 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 PEX6Q13608 980 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 KRT81Q14533 505 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 IQCB1Q15051 598 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 CLPPQ16740 277 aaPredicted RBP11.98□□□□□ -0.49
COL16A1-210ENST00000474000 TDRD12Q587J7 1177 aaKnown RBP11.98□□□□□ -0.49
COL16A1-210ENST00000474000 MANEAQ5SRI9 462 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 CCDC122Q5T0U0 273 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 TMEM164Q5U3C3 297 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 NKAIN2Q5VXU1 208 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 LRRC66Q68CR7 880 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 DOK6Q6PKX4 331 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 ADAMTSL4Q6UY14 1074 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 NLRP8Q86W28 1048 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 DTX1Q86Y01 620 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 NAGSQ8N159 534 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL16A1-210ENST00000474000 RCBTB1Q8NDN9 531 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 PATE1Q8WXA2 126 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 SYN2Q92777 582 aaPredicted RBP11.98□□□□□ -0.49
COL16A1-210ENST00000474000 SCAMP4Q969E2 229 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 AP2M1Q96CW1 435 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 SCARF2Q96GP6 870 aaPredicted RBP11.98□□□□□ -0.49
COL16A1-210ENST00000474000 NUP85Q9BW27 656 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 FAM117AQ9C073 453 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 B3GNT4Q9C0J1 378 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 AKAP7Q9P0M2 348 aaPredicted RBP11.98□□□□□ -0.49
COL16A1-210ENST00000474000 RCOR3Q9P2K3 495 aaPredicted RBP11.98□□□□□ -0.49
COL16A1-210ENST00000474000 IL17BQ9UHF5 180 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 CD84Q9UIB8 345 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 ANAPC7Q9UJX3 599 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 PLEKHM1Q9Y4G2 1056 aa11.98□□□□□ -0.49
COL16A1-210ENST00000474000 HECTD1Q9ULT8 2610 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 A0A1W2PQJ5 194 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 MYO1FO00160 1098 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 HGSO14964 777 aaPredicted RBP11.97□□□□□ -0.49
COL16A1-210ENST00000474000 CES1P23141 567 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 CD82P27701 267 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 GARSP41250 739 aaKnown RBP11.97□□□□□ -0.49
COL16A1-210ENST00000474000 ACTR1BP42025 376 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 ACTR1AP61163 376 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 GALNT2Q10471 571 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 IHHQ14623 411 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 NFKBIBQ15653 356 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 ATP13A4Q4VNC1 1196 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 VASH2Q86V25 355 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 FAM71BQ8TC56 605 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 CPLX3Q8WVH0 158 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 EXTL1Q92935 676 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 POLR1EQ9GZS1 481 aaKnown RBP11.97□□□□□ -0.49
COL16A1-210ENST00000474000 CDH19Q9H159 772 aa11.97□□□□□ -0.49
COL16A1-210ENST00000474000 RBM22Q9NW64 420 aaKnown RBP eCLIP11.97□□□□□ -0.49
COL16A1-210ENST00000474000 HEMK1Q9Y5R4 338 aaPredicted RBP11.97□□□□□ -0.49
COL16A1-210ENST00000474000 NAV2Q8IVL1 2488 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 TRBV23OR9-2A0A075B6M9 112 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 A0A087X0T9 212 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 A0A0J9YYE9 177 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 MATN3O15232 486 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 TRBC1P01850 177 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 ITGB2P05107 769 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 SERPING1P05155 500 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 FAM228BP0C875 321 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 FGF3P11487 239 aaPredicted RBP11.96□□□□□ -0.49
COL16A1-210ENST00000474000 ZNF30P17039 623 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 ITGB6P18564 788 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 CCNCP24863 283 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 MPSTP25325 297 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 PBX1P40424 430 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 ARSEP51690 589 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 LIMK2P53671 638 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 EPHB1P54762 984 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 DSC2Q02487 901 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 SQSTM1Q13501 440 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 DPYSL3Q14195 570 aa11.96□□□□□ -0.49
COL16A1-210ENST00000474000 PAFAH1B3Q15102 231 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms