RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ECT2Q9H8V3 914 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 SFXN1Q9H9B4 322 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 INTS10Q9NVR2 710 aaKnown RBP17.96■□□□□ 0.47
VARS2-206ENST00000473916 ERVW-1Q9UQF0 538 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 FAM50BQ9Y247 325 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 PKP3Q9Y446 797 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 TTC34A8MYJ7 566 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 NDUFS3O75489 264 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 DCTN3O75935 186 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 MAPK8P45983 427 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 NAGLUP54802 743 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 SETDB1Q15047 1291 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 TSNAXIP1Q2TAA8 658 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 LIPMQ5VYY2 423 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 KIAA0907Q7Z7F0 614 aaPredicted RBP17.95■□□□□ 0.46
VARS2-206ENST00000473916 METTL3Q86U44 580 aaKnown RBP17.95■□□□□ 0.46
VARS2-206ENST00000473916 LCA5Q86VQ0 697 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 ZNF366Q8N895 744 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 ZNF781Q8N8C0 355 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 RDH11Q8TC12 318 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 ISG20Q96AZ6 181 aaKnown RBP17.95■□□□□ 0.46
VARS2-206ENST00000473916 SKA1Q96BD8 255 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 PTERQ96BW5 349 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 MRGPRX3Q96LB0 322 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 ASB16Q96NS5 453 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 SLC30A3Q99726 388 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 SHCBP1LQ9BZQ2 653 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 EBF3Q9H4W6 596 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 ZFYVE1Q9HBF4 777 aa17.95■□□□□ 0.46
VARS2-206ENST00000473916 CAPN8A6NHC0 703 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 ZBTB14O43829 449 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 CBX6O95503 412 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 ADH5P11766 374 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 PTPRNQ16849 979 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 FAM83EQ2M2I3 478 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 CARD16Q5EG05 197 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 CTSL3PQ5NE16 218 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 VWA5B1Q5TIE3 1220 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 FAM219BQ5XKK7 198 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 RPS27LQ71UM5 84 aaKnown RBP17.94■□□□□ 0.46
VARS2-206ENST00000473916 TAS2R42Q7RTR8 314 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 CLNKQ7Z7G1 428 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 OR2A12Q8NGT7 310 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 PIWIL2Q8TC59 973 aaKnown RBP17.94■□□□□ 0.46
VARS2-206ENST00000473916 OSCP1Q8WVF1 389 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 OTUB2Q96DC9 234 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 MRPL57Q9BQC6 102 aaKnown RBP17.94■□□□□ 0.46
VARS2-206ENST00000473916 ALG9Q9H6U8 611 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 ACTR5Q9H9F9 607 aaPredicted RBP17.94■□□□□ 0.46
VARS2-206ENST00000473916 CYP4F12Q9HCS2 524 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 ZFP69BQ9UJL9 534 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 COL4A3Q01955 1670 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 PLXNB3Q9ULL4 1909 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 H3BMM5 538 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 H7C0S8 307 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 SRP72O76094 671 aaKnown RBP17.94■□□□□ 0.46
VARS2-206ENST00000473916 ZNF37AP17032 561 aaPredicted RBP17.94■□□□□ 0.46
VARS2-206ENST00000473916 TFEBP19484 476 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 FSHRP23945 695 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 TARSP26639 723 aaKnown RBP17.94■□□□□ 0.46
VARS2-206ENST00000473916 RPL26P61254 145 aaKnown RBP17.94■□□□□ 0.46
VARS2-206ENST00000473916 NAIF1Q69YI7 327 aaPredicted RBP17.94■□□□□ 0.46
VARS2-206ENST00000473916 RFLNAQ6ZTI6 216 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 AHI1Q8N157 1196 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 PCDH20Q8N6Y1 951 aaKnown RBP17.94■□□□□ 0.46
VARS2-206ENST00000473916 ECHDC3Q96DC8 303 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 CIPCQ9C0C6 399 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 SUV39H2Q9H5I1 410 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 KCNK4Q9NYG8 393 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 RPL26L1Q9UNX3 145 aaKnown RBP17.94■□□□□ 0.46
VARS2-206ENST00000473916 TCF20Q9UGU0 1960 aaKnown RBP17.94■□□□□ 0.46
VARS2-206ENST00000473916 PIKFYVEQ9Y2I7 2098 aa17.94■□□□□ 0.46
VARS2-206ENST00000473916 NIPSNAP2O75323 286 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 RHOBTB1O94844 696 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 HSPA4LO95757 839 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 CISD3P0C7P0 127 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 POLR2EP19388 210 aaKnown RBP17.93■□□□□ 0.46
VARS2-206ENST00000473916 MPSTP25325 297 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 SLC6A11P48066 632 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 SUOXP51687 545 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 CTC1Q2NKJ3 1217 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 AGAP9Q5VTM2 703 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 SFTPA1Q8IWL2 248 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 MICALL1Q8N3F8 863 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.93■□□□□ 0.46
VARS2-206ENST00000473916 GBP7Q8N8V2 638 aaPredicted RBP17.93■□□□□ 0.46
VARS2-206ENST00000473916 PPP4R1Q8TF05 950 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 FRS2Q8WU20 508 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 NMUR2Q9GZQ4 415 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 POMKQ9H5K3 350 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 ARMCX1Q9P291 453 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 ZMYM5Q9UJ78 669 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 MID2Q9UJV3 735 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 IKZF3Q9UKT9 509 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 IQCF5A8MTL0 148 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 ZNF195O14628 629 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 SLC9A3R1O14745 358 aaPredicted RBP17.93■□□□□ 0.46
VARS2-206ENST00000473916 PRAMEF1O95521 474 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 T-ENOLP0DO92 83 aa17.93■□□□□ 0.46
VARS2-206ENST00000473916 BPIP17213 487 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms