RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 GOLGA6DP0CG33 693 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 ZNF28P17035 718 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 CTPS1P17812 591 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 ERCC2P18074 760 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 NSFP46459 744 aaKnown RBP12.56□□□□□ -0.4
TRAF4-209ENST00000473421 NSUN2Q08J23 767 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRAF4-209ENST00000473421 CLPPQ16740 277 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-209ENST00000473421 TSR1Q2NL82 804 aaKnown RBP12.56□□□□□ -0.4
TRAF4-209ENST00000473421 PYCR3Q53H96 274 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 TECPR1Q7Z6L1 1165 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 NLGN4XQ8N0W4 816 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 NLGN4YQ8NFZ3 816 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-209ENST00000473421 PDCD6IPQ8WUM4 868 aaKnown RBP12.56□□□□□ -0.4
TRAF4-209ENST00000473421 STARD8Q92502 1023 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 SCARF2Q96GP6 870 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-209ENST00000473421 CNPY3Q9BT09 278 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 DHX35Q9H5Z1 703 aaKnown RBP12.56□□□□□ -0.4
TRAF4-209ENST00000473421 NOD2Q9HC29 1040 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 GOLGA6AQ9NYA3 693 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 PCSK1NQ9UHG2 260 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 AP4E1Q9UPM8 1137 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 TNRC6AQ8NDV7 1962 aaKnown RBP12.56□□□□□ -0.4
TRAF4-209ENST00000473421 UNC79Q9P2D8 2635 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 ARHGAP42A6NI28 874 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 PDE2AO00408 941 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-209ENST00000473421 EEF2KO00418 725 aaKnown RBP12.55□□□□□ -0.4
TRAF4-209ENST00000473421 ATMINO43313 823 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-209ENST00000473421 STK17BO94768 372 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 PDHA1P08559 390 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 VIPR1P32241 457 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 CD97P48960 835 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 MAXP61244 160 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 LACTB2Q53H82 288 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-209ENST00000473421 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-209ENST00000473421 RAET1GQ6H3X3 334 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 DNAJC24Q6P3W2 148 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 FAM114A1Q8IWE2 563 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 SFRP1Q8N474 314 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 PAF1Q8N7H5 531 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 APOBEC4Q8WW27 367 aaKnown RBP12.55□□□□□ -0.4
TRAF4-209ENST00000473421 CATSPER2Q96P56 530 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 PSKH2Q96QS6 385 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 SNRNP25Q9BV90 132 aaKnown RBP12.55□□□□□ -0.4
TRAF4-209ENST00000473421 ASPSCR1Q9BZE9 553 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 ABCG8Q9H221 673 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 SP110Q9HB58 689 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 ETNK2Q9NVF9 386 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 KLHL3Q9UH77 587 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 SIK3Q9Y2K2 1263 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 KCNMB2Q9Y691 235 aa12.55□□□□□ -0.4
TRAF4-209ENST00000473421 DLGAP3O95886 979 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 FASLGP48023 281 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 AP1S1P61966 158 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 POLR2LP62875 67 aaKnown RBP12.54□□□□□ -0.4
TRAF4-209ENST00000473421 IL10RBQ08334 325 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 NFATC2Q13469 925 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 BIRC2Q13490 618 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 LBRQ14739 615 aaKnown RBP12.54□□□□□ -0.4
TRAF4-209ENST00000473421 TRIM72Q6ZMU5 477 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 RFX8Q6ZV50 586 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 NCSTNQ92542 709 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 SPOCK2Q92563 424 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 OR2M4Q96R27 311 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 TBC1D10AQ9BXI6 508 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 CWC15Q9P013 229 aaKnown RBP12.54□□□□□ -0.4
TRAF4-209ENST00000473421 TBC1D29Q9UFV1 150 aa12.54□□□□□ -0.4
TRAF4-209ENST00000473421 TMEM184BQ9Y519 407 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-209ENST00000473421 OAS3Q9Y6K5 1087 aaKnown RBP12.54□□□□□ -0.4
TRAF4-209ENST00000473421 CACNA1DQ01668 2161 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 MYO9AB2RTY4 2548 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 INPP4BO15327 924 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 CPP00450 1065 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 ATP1A1P05023 1023 aaKnown RBP12.53□□□□□ -0.4
TRAF4-209ENST00000473421 CALB1P05937 261 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 TCF4P15884 667 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 MAP4P27816 1152 aaKnown RBP12.53□□□□□ -0.4
TRAF4-209ENST00000473421 ERCC5P28715 1186 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-209ENST00000473421 STAT5AP42229 794 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 GFERP55789 205 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 PTSQ03393 145 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 DPYSQ14117 519 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 KRT31Q15323 416 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 PPP6R3Q5H9R7 873 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-209ENST00000473421 FAM182AQ5T1J6 154 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 MCOLN2Q8IZK6 566 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 CCDC112Q8NEF3 446 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 PIH1D2Q8WWB5 315 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 MCCC1Q96RQ3 725 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-209ENST00000473421 SLC38A3Q99624 504 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 AGPAT1Q99943 283 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 LRRC4CQ9HCJ2 640 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 FBXO8Q9NRD0 319 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 SEPT11Q9NVA2 429 aaKnown RBP12.53□□□□□ -0.4
TRAF4-209ENST00000473421 SIDT1Q9NXL6 827 aaKnown RBP12.53□□□□□ -0.4
TRAF4-209ENST00000473421 CNOT6Q9ULM6 557 aaKnown RBP12.53□□□□□ -0.4
TRAF4-209ENST00000473421 ITPR2Q14571 2701 aa12.53□□□□□ -0.4
TRAF4-209ENST00000473421 A6NCN8 305 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 DNAJC6O75061 913 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 SEMA7AO75326 666 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 DNAJB5O75953 348 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms