RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	ACSM2B	Q68CK6	577 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	AWAT2	Q6E213	333 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	KIAA0930	Q6ICG6	404 aa	Predicted RBP	3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	C9orf47	Q6ZRZ4	202 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	HIST3H2A	Q7L7L0	130 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	FOXRED2	Q8IWF2	684 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	TEX11	Q8IYF3	940 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	OR14A16	Q8NHC5	309 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	MAGEC3	Q8TD91	643 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	WFIKKN2	Q8TEU8	576 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	FAM216A	Q8WUB2	273 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	OIT3	Q8WWZ8	545 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	ADAMTS14	Q8WXS8	1223 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	FEM1C	Q96JP0	617 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	C1QTNF1	Q9BXJ1	281 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	MAK16	Q9BXY0	300 aa	Known RBP	3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	C17orf75	Q9HAS0	396 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	CNGB3	Q9NQW8	809 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	PLSCR4	Q9NRQ2	329 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	SETD4	Q9NVD3	440 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	MTMR10	Q9NXD2	777 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	OGFR	Q9NZT2	677 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	FBXW11	Q9UKB1	542 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	TTC7A	Q9ULT0	858 aa	Predicted RBP	3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	EXO1	Q9UQ84	846 aa	Known RBP	3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	TMEM5	Q9Y2B1	443 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	RABGAP1	Q9Y3P9	1069 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	TTLL3	Q9Y4R7	772 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	SNX8	Q9Y5X2	465 aa		3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044	ZNF644	Q9H582	1327 aa	Predicted RBP	3.86	□□□□□ -1.79
PTCD3-209	ENST00000472044		A0A1W2PQ09	198 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	C1orf226	A1L170	272 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	GOLGA6L9	A6NEM1	432 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	NDUFS7	O75251	213 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	SERPINI2	O75830	405 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	PGM3	O95394	542 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	IGKV2-30	P06310	120 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	HSP90AA1	P07900	732 aa	Known RBP	3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	G6PD	P11413	515 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	SCP2	P22307	547 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	RRM1	P23921	792 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	CDC25A	P30304	524 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	RAD52	P43351	418 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	CAMP	P49913	170 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	CRYZ	Q08257	329 aa	Known RBP	3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	LRMP	Q12912	555 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	STK4	Q13043	487 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	IK	Q13123	557 aa	Predicted RBP	3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	KCTD2	Q14681	263 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	EIF2S3L	Q2VIR3	472 aa	Known RBP	3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	AMZ1	Q400G9	498 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	LRIF1	Q5T3J3	769 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	FRG2	Q64ET8	278 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	TYW3	Q6IPR3	259 aa	Known RBP	3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	ZNF549	Q6P9A3	640 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	CHERP	Q8IWX8	916 aa	Known RBP	3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	CLIP4	Q8N3C7	705 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	CCDC89	Q8N998	374 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	HJURP	Q8NCD3	748 aa	Predicted RBP	3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	NSMCE1	Q8WV22	266 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	ASB5	Q8WWX0	329 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	LRRC59	Q96AG4	307 aa	Known RBP	3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	ELMOD3	Q96FG2	381 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	CALML4	Q96GE6	196 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	TXNDC15	Q96J42	360 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	NEUROD6	Q96NK8	337 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	SPRY4	Q9C004	299 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	PLK3	Q9H4B4	646 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	SLC28A3	Q9HAS3	691 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	ACSS1	Q9NUB1	689 aa	Predicted RBP	3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	COPG2	Q9UBF2	871 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	TINAG	Q9UJW2	476 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	MYO6	Q9UM54	1294 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	NENF	Q9UMX5	172 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	CLIC4	Q9Y696	253 aa		3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	TRIP12	Q14669	1992 aa	Predicted RBP	3.85	□□□□□ -1.79
PTCD3-209	ENST00000472044	IGLV5-52	A0A0A0MRZ9	124 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	KANSL1L	A0AUZ9	987 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	ATP2A1	O14983	1001 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	PLRG1	O43660	514 aa	Known RBP	3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	GJB3	O75712	270 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	BMP15	O95972	392 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	IGHV4-30-4	P0DP06	118 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	NR2F1	P10589	423 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	SRC	P12931	536 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	LMO1	P25800	156 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	PON1	P27169	355 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	C21orf33	P30042	268 aa	Predicted RBP	3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	ACTN2	P35609	894 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	HNRNPH2	P55795	449 aa	Known RBP	3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	MRPS5	P82675	430 aa	Known RBP	3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	BNC1	Q01954	994 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	TRAF3	Q13114	568 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	TOMM20	Q15388	145 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	ZNF260	Q3ZCT1	412 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	PDXDC1	Q6P996	788 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	EPHX4	Q8IUS5	362 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	MCEMP1	Q8IX19	187 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	DSEL	Q8IZU8	1212 aa		3.84	□□□□□ -1.79
PTCD3-209	ENST00000472044	TAGAP	Q8N103	731 aa		3.84	□□□□□ -1.79

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