RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CELSR2Q9HCU4 2923 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 WIPF3A6NGB9 483 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 KATNA1O75449 491 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 PALMO75781 387 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 DNAJB5O75953 348 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 SORBS2O94875 1100 aaKnown RBP18.9■□□□□ 0.62
SORT1-203ENST00000471996 HEXIM1O94992 359 aaKnown RBP18.9■□□□□ 0.62
SORT1-203ENST00000471996 MAP3K6O95382 1288 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 RECKO95980 971 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 ZNF28P17035 718 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 MMP8P22894 467 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 ETV3P41162 512 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 HHEXQ03014 270 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 SEMA5AQ13591 1074 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 NADK2Q4G0N4 442 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 RAET1GQ6H3X3 334 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 DOK6Q6PKX4 331 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 GALNT6Q8NCL4 622 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 SPOCK2Q92563 424 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 NSMCE3Q96MG7 304 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 TWSG1Q9GZX9 223 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 KLHL3Q9UH77 587 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 ABCA12Q86UK0 2595 aa18.9■□□□□ 0.62
SORT1-203ENST00000471996 LRBAP50851 2863 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 GOLGA6CA6NDK9 693 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 GOLGA6BA6NDN3 693 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 FGF10O15520 208 aaPredicted RBP18.89■□□□□ 0.61
SORT1-203ENST00000471996 CREG1O75629 220 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 GOLGA6DP0CG33 693 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 ELAVL4P26378 380 aaKnown RBP18.89■□□□□ 0.61
SORT1-203ENST00000471996 VIPR1P32241 457 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 NDST2P52849 883 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 RIPPLY3P57055 190 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 PYCR3Q53H96 274 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 DENND2CQ68D51 928 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 LYSMD3Q7Z3D4 306 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 HSD11B1LQ7Z5J1 315 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 RNF31Q96EP0 1072 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 CINPQ9BW66 212 aaPredicted RBP18.89■□□□□ 0.61
SORT1-203ENST00000471996 TRIM55Q9BYV6 548 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 SARS2Q9NP81 518 aaKnown RBP18.89■□□□□ 0.61
SORT1-203ENST00000471996 GOLGA6AQ9NYA3 693 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 PCDHGA6Q9Y5G7 932 aa18.89■□□□□ 0.61
SORT1-203ENST00000471996 PIPSLA2A3N6 862 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 TCP11X1B4DZS4 312 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 EML2O95834 649 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 ANKRD34CP0C6C1 535 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 RFC1P35251 1148 aaPredicted RBP18.88■□□□□ 0.61
SORT1-203ENST00000471996 PAPOLAP51003 745 aaKnown RBP18.88■□□□□ 0.61
SORT1-203ENST00000471996 SCNN1BP51168 640 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 EPHA4P54764 986 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 FOXM1Q08050 763 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 NFATC2Q13469 925 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 LRP8Q14114 963 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 Q6ZVL8 140 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 EPS8L1Q8TE68 723 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 SH3KBP1Q96B97 665 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 STAMBPL1Q96FJ0 436 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 CELF6Q96J87 481 aaKnown RBP18.88■□□□□ 0.61
SORT1-203ENST00000471996 SLC39A8Q9C0K1 460 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 DONSONQ9NYP3 566 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 RWDD2AQ9UIY3 292 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 FZD10Q9ULW2 581 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 TMEM98Q9Y2Y6 226 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 FHOD1Q9Y613 1164 aa18.88■□□□□ 0.61
SORT1-203ENST00000471996 ARHGAP42A6NI28 874 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 PSMD11O00231 422 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 KRT3P12035 628 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 GPD1P21695 349 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 MAPK9P45984 424 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 MTIF2P46199 727 aaKnown RBP18.87■□□□□ 0.61
SORT1-203ENST00000471996 PGDP52209 483 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 AP1S1P61966 158 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 DPTQ07507 201 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 MRPL49Q13405 166 aaKnown RBP18.87■□□□□ 0.61
SORT1-203ENST00000471996 ESPL1Q14674 2120 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 INPP5JQ15735 1006 aaPredicted RBP18.87■□□□□ 0.61
SORT1-203ENST00000471996 SCYL2Q6P3W7 929 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 PRR7Q8TB68 274 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 PHF12Q96QT6 1004 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 C11orf70Q9BRQ4 267 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 EPB41L1Q9H4G0 881 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 STN1Q9H668 368 aaKnown RBP18.87■□□□□ 0.61
SORT1-203ENST00000471996 RCOR3Q9P2K3 495 aaPredicted RBP18.87■□□□□ 0.61
SORT1-203ENST00000471996 CRYBG3Q68DQ2 2970 aa18.87■□□□□ 0.61
SORT1-203ENST00000471996 MN1Q10571 1320 aaPredicted RBP18.86■□□□□ 0.61
SORT1-203ENST00000471996 A0A1W2PQ67 120 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 HTRA2O43464 458 aaPredicted RBP18.86■□□□□ 0.61
SORT1-203ENST00000471996 KRT38O76015 456 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 KIAA0754O94854 1291 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 SOD1P00441 154 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 CYP1A1P04798 512 aaPredicted RBP18.86■□□□□ 0.61
SORT1-203ENST00000471996 LHCGRP22888 699 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 GPR1P46091 355 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 RFTN1Q14699 578 aaPredicted RBP18.86■□□□□ 0.61
SORT1-203ENST00000471996 KLHDC7AQ5VTJ3 777 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 WDR59Q6PJI9 974 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 ADAMTSL4Q6UY14 1074 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 MARK2Q7KZI7 788 aaKnown RBP18.86■□□□□ 0.61
SORT1-203ENST00000471996 GALNT13Q8IUC8 556 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms